Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21441000 . A C CCDS6508.1:NM_024013.2:c.494gAg>gCg_NP_076918.1:p.165E>A Homo sapiens interferon alpha 1 (IFNA1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 98.82 3e-124 X-RAY
 2012-02-29 GLU A:145 A:142 5.0 0.026 H -60.1 -44.7 2.0 0.011 0.015 B:None:0.016
GLU C:145 C:142 6.0 0.032 H -64.7 -46.2 NA NA NA
2lms 1 P01563 82.53 1e-96 NMR
 2012-12-05 GLU A:142 A:141 18.0 0.095 H -59.4 -54.8 18.0 0.095 0.0
2lag 2 P01563 82.53 1e-96 NMR
 2011-08-17 GLU B:141 A:141 1.0 0.005 H -60.0 -43.6 1.0 0.005 0.0
4z5r 1 P01563 82.53 1e-96 X-RAY
 2015-07-08 GLU A:141 D:141 6.0 0.032 H -68.0 -44.8 1.0 0.005 0.027 B:None:0.026
GLU D:141 E:141 6.0 0.032 H -68.3 -47.1 NA NA NA
GLU G:141 F:141 6.0 0.032 H -69.7 -45.1 NA NA NA
GLU J:141 G:141 5.0 0.026 H -70.1 -47.3 NA NA NA
GLU M:141 H:141 6.0 0.032 H -69.1 -44.0 NA NA NA
GLU P:141 I:141 5.0 0.026 H -68.5 -47.3 NA NA NA
GLU S:141 X:141 6.0 0.032 H -69.0 -45.6 NA NA NA
GLU V:141 N:141 5.0 0.026 H -68.7 -45.7 NA NA NA
3se3 2 Q86UP4 81.33 1e-94 X-RAY
 2011-08-31 GLU B:142 B:141 4.0 0.021 H -66.9 -41.8 3.0 0.016 0.005 C:P48551:0.005
4ypg 3 P01563 82.61 5e-94 X-RAY
 2015-05-06 GLU C:143 C:141 3.0 0.016 H -64.9 -41.9 3.0 0.016 0.0
GLU D:143 D:141 3.0 0.016 H -65.6 -45.8 NA NA NA
3s9d 1 P01563 81.33 1e-93 X-RAY
 2011-08-31 GLU A:144 A:141 4.0 0.021 H -64.8 -43.8 3.0 0.016 0.005 B:P48551:0.005
 HOH
 2.723
 OE2
 O
GLU C:144 C:141 3.0 0.016 H -55.9 -48.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01562-f1 1 P01562 100.0 1e-141 GLU A:165 A:165 4.0 0.021 H -64.1 -41.8
af-p01569-f1 1 P01569 84.13 2e-118 GLU A:165 A:165 5.0 0.026 H -64.8 -39.8
af-p01570-f1 1 P01570 82.01 9e-115 GLU A:165 A:165 3.0 0.016 H -65.2 -38.9
af-p05013-f1 1 P05013 84.66 1e-114 GLU A:165 A:165 2.0 0.011 H -68.6 -38.5
af-p01568-f1 1 P01568 80.95 1e-111 GLU A:165 A:165 4.0 0.021 H -64.8 -40.6
af-p01563-f1 1 P01563 81.48 3e-104 GLU A:164 A:164 2.0 0.011 H -67.6 -38.5