Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 100433434 . C A CCDS6728.1:NM_002486.4:c.2326Cct>Act_NP_002477.1:p.776P>T Homo sapiens nuclear cap binding protein subunit 1 (NCBP1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1n52 1 Q09161 100.0 0.0 X-RAY
 2003-02-18 PRO A:776 A:776 90.0 0.621 H -57.4 -28.7 90.0 0.621 0.0 HOH
 4.856
 O
 O
1n54 1 Q09161 100.0 0.0 X-RAY
 2003-02-18 PRO A:776 A:776 90.0 0.621 H -60.1 -32.6 90.0 0.621 0.0 HOH
 3.695
 O
 O
3fex 1 Q09161 100.0 0.0 X-RAY
 2009-08-11 PRO A:776 A:776 93.0 0.641 H -47.4 -41.9 93.0 0.641 0.0
3fey 1 Q09161 100.0 0.0 X-RAY
 2009-08-11 PRO A:776 A:776 96.0 0.662 H -50.6 -35.5 96.0 0.662 0.0 HOH
 3.340
 CB
 O
7abg 1 Q09161 100.0 0.0 EM
 2020-12-23 PRO A:776 A5:776 108.0 0.745 H -57.4 -28.7 108.0 0.745 0.0
5oob 1 Q09161 100.0 0.0 X-RAY
 2017-11-15 PRO A:758 A:776 93.0 0.641 H -58.6 -24.7 93.0 0.641 0.0
PRO C:758 C:776 91.0 0.628 H -58.6 -24.2 NA NA NA
PRO F:758 F:776 89.0 0.614 H -58.3 -24.4 NA NA NA
PRO H:758 I:776 92.0 0.634 H -59.7 -23.8 NA NA NA
1h2v 1 Q09161 99.87 0.0 X-RAY
 2002-10-17 PRO A:757 C:776 90.0 0.621 H -50.8 -30.3 90.0 0.621 0.0 HOH
 4.130
 O
 O
5oo6 1 Q09161 99.87 0.0 X-RAY
 2017-11-15 PRO A:758 A:776 96.0 0.662 H -59.6 -18.3 96.0 0.662 0.0
PRO C:758 D:776 94.0 0.648 H -59.5 -18.3 NA NA NA
PRO E:758 G:776 98.0 0.676 H -59.8 -18.2 NA NA NA
PRO G:758 J:776 97.0 0.669 H -59.7 -18.2 NA NA NA
PRO I:758 M:776 94.0 0.648 H -59.5 -18.4 NA NA NA
PRO K:758 P:776 98.0 0.676 H -59.7 -18.2 NA NA NA
PRO M:758 S:776 97.0 0.669 H -59.7 -18.2 NA NA NA
PRO O:758 V:776 96.0 0.662 H -59.6 -18.3 NA NA NA
6d0y 1 Q09161 99.87 0.0 X-RAY
 2018-04-25 PRO A:754 C:776 96.0 0.662 H -56.2 -25.1 96.0 0.662 0.0 HOH
 6.384
 O
 O
1h6k 1 Q09161 98.05 0.0 X-RAY
 2001-09-13 PRO A:743 A:776 90.0 0.621 H -52.8 -31.9 90.0 0.621 0.0 HOH
 3.150
 O
 O
PRO B:743 B:776 93.0 0.641 H -55.0 -32.1 NA NA NA
PRO C:743 C:776 94.0 0.648 H -55.2 -24.5 NA NA NA
1h2t 1 Q09161 93.51 0.0 X-RAY
 2002-10-17 PRO A:709 C:776 93.0 0.641 H -47.2 -24.7 93.0 0.641 0.0 HOH
 3.137
 O
 O
1h2u 1 Q09161 93.51 0.0 X-RAY
 2002-10-17 PRO A:709 A:776 95.0 0.655 H -50.7 -32.6 95.0 0.655 0.0 HOH
 3.471
 O
 O
PRO B:709 B:776 95.0 0.655 H -50.3 -29.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q09161-f1 1 Q09161 100.0 0.0 PRO A:776 A:776 92.0 0.634 H -56.0 -28.4