Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 123779957 . C A CCDS6826.1:NM_001735.2:c.1680tgG>tgT_NP_001726.2:p.560W>C Homo sapiens complement C5 (C5), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3prx 1 P01031 100.0 0.0 X-RAY
 2011-01-19 TRP A:560 A:560 48.0 0.188 E -109.3 149.5 48.0 0.188 0.0
TRP C:560 C:560 47.0 0.184 E -109.9 147.0 NA NA NA
3pvm 1 P01031 100.0 0.0 X-RAY
 2011-01-19 TRP A:560 A:560 30.0 0.118 E -105.2 148.5 30.0 0.118 0.0
TRP C:560 C:560 30.0 0.118 E -105.4 148.0 NA NA NA
5i5k 1 P01031 100.0 0.0 X-RAY
 2016-03-16 TRP A:560 B:560 93.0 0.365 E -88.9 138.8 93.0 0.365 0.0
TRP D:560 A:560 88.0 0.345 E -91.1 136.9 NA NA NA
7ad6 1 P01031 100.0 0.0 X-RAY
 2021-03-10 TRP A:560 NA:NA DO NA DO DO DO NA NA NA
TRP B:560 B:560 88.0 0.345 E -105.9 134.5 88.0 0.345 0.0
7ad7 1 P01031 100.0 0.0 X-RAY
 2021-03-10 TRP A:560 B:560 94.0 0.369 E -92.1 131.5 94.0 0.369 0.0 HOH
 2.757
 NE1
 O
TRP B:560 NA:NA DO NA DO DO DO NA NA NA
3cu7 1 P01031 99.94 0.0 X-RAY
 2008-06-10 TRP A:560 A:560 42.0 0.165 E -83.5 122.0 42.0 0.165 0.0
TRP B:560 B:560 41.0 0.161 E -83.4 122.0 NA NA NA
3kls 1 P01031 99.94 0.0 X-RAY
 2009-11-24 TRP A:560 A:560 38.0 0.149 E -85.8 128.1 38.0 0.149 0.0
TRP C:560 B:560 37.0 0.145 E -85.4 127.1 NA NA NA
3km9 1 P01031 99.94 0.0 X-RAY
 2009-12-01 TRP A:560 A:560 28.0 0.11 E -95.1 143.2 28.0 0.11 0.0
TRP C:560 B:560 34.0 0.133 E -89.1 151.6 NA NA NA
4e0s 1 P01031 99.94 0.0 X-RAY
 2012-04-18 TRP A:560 A:560 41.0 0.161 E -96.6 122.6 41.0 0.161 0.0
7nyc 6 P01031 100.0 0.0 EM
 2021-10-06 TRP G:542 A:542 35.0 0.137 E -76.2 131.1 35.0 0.137 0.0
7nyd 7 P01031 100.0 0.0 EM
 2021-10-06 TRP H:542 A:542 20.0 0.078 E -76.9 141.3 20.0 0.078 0.0
4a5w 1 P01031 99.39 0.0 X-RAY
 2012-03-14 TRP A:542 A:560 62.0 0.243 E -60.1 133.3 62.0 0.243 0.0
6h03 1 P01031 99.39 0.0 EM
 2018-12-19 TRP A:542 A:560 33.0 0.129 E -55.9 156.1 33.0 0.129 0.0
6h04 2 P01031 99.39 0.0 EM
 2018-12-19 TRP S:542 A:560 40.0 0.157 E -55.4 157.1 40.0 0.157 0.0
6i2x 1 P01031 100.0 0.0 ELECTRON CRYSTALLOGRAPHY
 2019-06-26 TRP A:542 C:560 16.0 0.063 E -115.5 127.8 16.0 0.063 0.0
5hcc 1 P01031 100.0 0.0 X-RAY
 2016-03-30 TRP A:542 B:560 80.0 0.314 E -102.6 124.9 80.0 0.314 0.0 HOH
 5.949
 NE1
 O
5hcd 1 P01031 100.0 0.0 X-RAY
 2016-03-30 TRP A:542 B:560 79.0 0.31 E -102.9 124.9 79.0 0.31 0.0
5hce 1 P01031 100.0 0.0 X-RAY
 2016-03-30 TRP A:542 B:560 76.0 0.298 E -102.6 124.1 76.0 0.298 0.0
6rqj 4 P01031 100.0 0.0 EM
 2020-01-08 TRP D:542 B:560 82.0 0.322 E -127.8 117.7 82.0 0.322 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01031-f1 1 P01031 100.0 0.0 TRP A:560 A:560 66.0 0.259 E -87.7 133.2