Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr9 | 131860310 | . | C | A | CCDS6919.1:NM_000755.3:c.1446atG>atT_NP_000746.2:p.482M>I | Homo sapiens carnitine O-acetyltransferase (CRAT), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1nm8 | 1 | P43155 | 98.35 | 0.0 |
X-RAY |
2003-03-11 | MET | A:461 | A:461 | 14.0 | 0.076 | H | -50.7 | -43.6 | 14.0 | 0.076 | 0.0 |
HOH |
3.092 |
O |
O |
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1s5o | 1 | P43155 | 98.35 | 0.0 |
X-RAY |
2004-02-03 | MET | A:461 | A:461 | 15.0 | 0.081 | H | -57.2 | -40.9 | 15.0 | 0.081 | 0.0 |
HOH |
3.543 |
N |
O |
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1ndb | 1 | P47934 | 91.28 | 0.0 |
X-RAY |
2003-01-28 | MSE | A:453 | A:482 | 22.0 | 0.119 | H | -58.7 | -41.4 | 22.0 | 0.119 | 0.0 |
HOH |
2.840 |
O |
O |
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MSE | B:453 | B:482 | 25.0 | 0.135 | H | -56.6 | -42.5 | NA | NA | NA | |||||||||||||
1ndf | 1 | P47934 | 91.28 | 0.0 |
X-RAY |
2003-01-28 | MET | A:453 | A:482 | 20.0 | 0.108 | H | -62.5 | -38.1 | 20.0 | 0.108 | 0.0 |
HOH |
2.732 |
O |
O |
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MET | B:453 | B:482 | 22.0 | 0.119 | H | -56.0 | -39.5 | NA | NA | NA | |||||||||||||
1ndi | 1 | P47934 | 91.28 | 0.0 |
X-RAY |
2003-01-28 | MET | A:453 | A:482 | 15.0 | 0.081 | H | -73.1 | -76.2 | 15.0 | 0.081 | 0.0 |
HOH |
3.116 |
CG |
O |
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MET | B:453 | B:482 | 15.0 | 0.081 | H | -53.0 | -56.6 | NA | NA | NA | |||||||||||||
2h3p | 1 | Q3V1Y3 | 91.28 | 0.0 |
X-RAY |
2006-08-01 | MET | A:456 | A:482 | 22.0 | 0.119 | H | -64.2 | -40.4 | 22.0 | 0.119 | 0.0 |
HOH |
3.254 |
C |
O |
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MET | B:456 | B:482 | 26.0 | 0.141 | H | -57.2 | -38.2 | NA | NA | NA | |||||||||||||
2h3u | 1 | Q3V1Y3 | 91.28 | 0.0 |
X-RAY |
2006-08-01 | MET | A:456 | A:482 | 18.0 | 0.097 | H | -63.5 | -48.8 | 18.0 | 0.097 | 0.0 |
HOH |
3.547 |
CE |
O |
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MET | B:456 | B:482 | 23.0 | 0.124 | H | -54.5 | -39.3 | NA | NA | NA | |||||||||||||
1t7q | 1 | P47934 | 91.12 | 0.0 |
X-RAY |
2004-06-22 | MET | A:474 | A:482 | 21.0 | 0.114 | H | -55.5 | -40.5 | 21.0 | 0.114 | 0.0 |
HOH |
3.139 |
O |
O |
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MET | B:474 | B:482 | 25.0 | 0.135 | H | -58.9 | -36.7 | NA | NA | NA | |||||||||||||
1t7n | 1 | P47934 | 91.12 | 0.0 |
X-RAY |
2004-06-22 | MET | A:474 | A:482 | 25.0 | 0.135 | H | -61.3 | -39.0 | 25.0 | 0.135 | 0.0 |
HOH |
3.056 |
O |
O |
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1t7o | 1 | P47934 | 91.12 | 0.0 |
X-RAY |
2004-06-22 | MET | A:474 | A:482 | 25.0 | 0.135 | H | -46.9 | -41.4 | 25.0 | 0.135 | 0.0 |
HOH |
3.719 |
C |
O |
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2h3w | 1 | Q3V1Y3 | 90.94 | 0.0 |
X-RAY |
2006-08-01 | MET | A:456 | A:482 | 23.0 | 0.124 | H | -65.0 | -43.9 | 23.0 | 0.124 | 0.0 |
HOH |
3.878 |
C |
O |
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MET | B:456 | B:482 | 23.0 | 0.124 | H | -53.1 | -39.9 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p43155-f1 | 1 | P43155 | 99.84 | 0.0 | MET | A:482 | A:482 | 14.0 | 0.076 | H | -55.4 | -45.0 |