Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr9 | 131860625 | . | C | A | CCDS6919.1:NM_000755.3:c.1231Gtg>Ttg_NP_000746.2:p.411V>L | Homo sapiens carnitine O-acetyltransferase (CRAT), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1nm8 | 1 | P43155 | 98.35 | 0.0 |
X-RAY |
2003-03-11 | VAL | A:390 | A:390 | 16.0 | 0.103 | E | -119.6 | 130.1 | 16.0 | 0.103 | 0.0 |
HOH |
4.220 |
O |
O |
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1s5o | 1 | P43155 | 98.35 | 0.0 |
X-RAY |
2004-02-03 | VAL | A:390 | A:390 | 17.0 | 0.11 | E | -113.7 | 127.2 | 17.0 | 0.11 | 0.0 |
HOH |
4.324 |
O |
O |
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1ndb | 1 | P47934 | 91.28 | 0.0 |
X-RAY |
2003-01-28 | MSE | A:382 | A:411 | 10.0 | 0.054 | E | -97.5 | 135.5 | 10.0 | 0.054 | 0.0 |
HOH |
2.702 |
O |
O |
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MSE | B:382 | B:411 | 10.0 | 0.054 | E | -95.1 | 137.2 | NA | NA | NA | |||||||||||||
1ndf | 1 | P47934 | 91.28 | 0.0 |
X-RAY |
2003-01-28 | MET | A:382 | A:411 | 16.0 | 0.086 | E | -96.2 | 130.7 | 16.0 | 0.086 | 0.0 |
HOH |
2.758 |
O |
O |
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MET | B:382 | B:411 | 12.0 | 0.065 | E | -98.7 | 135.2 | NA | NA | NA | |||||||||||||
1ndi | 1 | P47934 | 91.28 | 0.0 |
X-RAY |
2003-01-28 | MET | A:382 | A:411 | 18.0 | 0.097 | E | -104.6 | 113.7 | 18.0 | 0.097 | 0.0 |
HOH |
4.491 |
O |
O |
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MET | B:382 | B:411 | 15.0 | 0.081 | -82.2 | 154.7 | NA | NA | NA | ||||||||||||||
2h3p | 1 | Q3V1Y3 | 91.28 | 0.0 |
X-RAY |
2006-08-01 | MET | A:385 | A:411 | 14.0 | 0.076 | E | -93.7 | 126.6 | 14.0 | 0.076 | 0.0 |
HOH |
2.665 |
O |
O |
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MET | B:385 | B:411 | 15.0 | 0.081 | E | -96.2 | 139.5 | NA | NA | NA | |||||||||||||
2h3u | 1 | Q3V1Y3 | 91.28 | 0.0 |
X-RAY |
2006-08-01 | MET | A:385 | A:411 | 15.0 | 0.081 | E | -96.7 | 132.8 | 15.0 | 0.081 | 0.0 |
HOH |
2.732 |
O |
O |
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MET | B:385 | B:411 | 15.0 | 0.081 | E | -95.0 | 135.6 | NA | NA | NA | |||||||||||||
1t7q | 1 | P47934 | 91.12 | 0.0 |
X-RAY |
2004-06-22 | MET | A:403 | A:411 | 18.0 | 0.097 | E | -93.9 | 135.5 | 18.0 | 0.097 | 0.0 |
HOH |
2.830 |
O |
O |
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MET | B:403 | B:411 | 20.0 | 0.108 | E | -95.9 | 131.8 | NA | NA | NA | |||||||||||||
1t7n | 1 | P47934 | 91.12 | 0.0 |
X-RAY |
2004-06-22 | MET | A:403 | A:411 | 17.0 | 0.092 | E | -94.6 | 132.0 | 17.0 | 0.092 | 0.0 |
HOH |
2.709 |
O |
O |
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1t7o | 1 | P47934 | 91.12 | 0.0 |
X-RAY |
2004-06-22 | MET | A:403 | A:411 | 14.0 | 0.076 | E | -93.1 | 115.7 | 14.0 | 0.076 | 0.0 |
HOH |
3.033 |
O |
O |
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2h3w | 1 | Q3V1Y3 | 90.94 | 0.0 |
X-RAY |
2006-08-01 | MET | A:385 | A:411 | 15.0 | 0.081 | E | -94.0 | 121.3 | 15.0 | 0.081 | 0.0 |
HOH |
2.677 |
O |
O |
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MET | B:385 | B:411 | 16.0 | 0.086 | E | -95.7 | 132.6 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p43155-f1 | 1 | P43155 | 99.84 | 0.0 | VAL | A:411 | A:411 | 15.0 | 0.097 | E | -116.4 | 117.2 |