Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr9 | 131866527 | . | T | A | CCDS6919.1:NM_000755.3:c.350tAc>tTc_NP_000746.2:p.117Y>F | Homo sapiens carnitine O-acetyltransferase (CRAT), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1nm8 | 1 | P43155 | 98.35 | 0.0 |
X-RAY |
2003-03-11 | TYR | A:96 | A:96 | 60.0 | 0.261 | T | -84.3 | -11.4 | 60.0 | 0.261 | 0.0 |
HOH |
2.796 |
OH |
O |
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1s5o | 1 | P43155 | 98.35 | 0.0 |
X-RAY |
2004-02-03 | TYR | A:96 | A:96 | 55.0 | 0.239 | T | -76.7 | -20.4 | 55.0 | 0.239 | 0.0 |
152 HOH |
6.419 2.703 |
O OH |
C5B O |
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1ndb | 1 | P47934 | 91.28 | 0.0 |
X-RAY |
2003-01-28 | TYR | A:88 | A:117 | 55.0 | 0.239 | T | -76.5 | -18.6 | 55.0 | 0.239 | 0.0 |
HOH |
2.845 |
O |
O |
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TYR | B:88 | B:117 | 63.0 | 0.274 | T | -78.7 | -20.0 | NA | NA | NA | |||||||||||||
1ndf | 1 | P47934 | 91.28 | 0.0 |
X-RAY |
2003-01-28 | TYR | A:88 | A:117 | 59.0 | 0.257 | T | -78.1 | -18.9 | 59.0 | 0.257 | 0.0 |
152 HOH |
6.555 2.825 |
O O |
C5C O |
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TYR | B:88 | B:117 | 56.0 | 0.243 | T | -76.6 | -16.6 | NA | NA | NA | |||||||||||||
1ndi | 1 | P47934 | 91.28 | 0.0 |
X-RAY |
2003-01-28 | TYR | A:88 | A:117 | 69.0 | 0.3 | T | -90.7 | -23.8 | 69.0 | 0.3 | 0.0 |
HOH |
3.810 |
CE2 |
O |
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TYR | B:88 | B:117 | 57.0 | 0.248 | T | -81.6 | -19.6 | NA | NA | NA | |||||||||||||
2h3p | 1 | Q3V1Y3 | 91.28 | 0.0 |
X-RAY |
2006-08-01 | TYR | A:91 | A:117 | 58.0 | 0.252 | T | -78.0 | -19.9 | 58.0 | 0.252 | 0.0 |
152 HOH |
6.421 2.726 |
O OH |
C5C O |
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TYR | B:91 | B:117 | 54.0 | 0.235 | T | -76.9 | -21.8 | NA | NA | NA | |||||||||||||
2h3u | 1 | Q3V1Y3 | 91.28 | 0.0 |
X-RAY |
2006-08-01 | TYR | A:91 | A:117 | 55.0 | 0.239 | T | -76.5 | -17.3 | 55.0 | 0.239 | 0.0 |
152 HOH |
6.493 2.636 |
O OH |
C5C O |
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TYR | B:91 | B:117 | 54.0 | 0.235 | T | -73.9 | -18.1 | NA | NA | NA | |||||||||||||
1t7q | 1 | P47934 | 91.12 | 0.0 |
X-RAY |
2004-06-22 | TYR | A:109 | A:117 | 55.0 | 0.239 | T | -79.9 | -19.9 | 55.0 | 0.239 | 0.0 |
152 EDO HOH |
6.534 9.358 2.775 |
O O OH |
C5C C2 O |
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TYR | B:109 | B:117 | 52.0 | 0.226 | T | -76.3 | -21.2 | NA | NA | NA | |||||||||||||
1t7n | 1 | P47934 | 91.12 | 0.0 |
X-RAY |
2004-06-22 | TYR | A:109 | A:117 | 50.0 | 0.217 | T | -86.2 | -11.5 | 50.0 | 0.217 | 0.0 |
HOH |
2.804 |
OH |
O |
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1t7o | 1 | P47934 | 91.12 | 0.0 |
X-RAY |
2004-06-22 | TYR | A:109 | A:117 | 46.0 | 0.2 | T | -88.6 | -18.6 | 46.0 | 0.2 | 0.0 |
152 HOH |
6.175 2.684 |
O O |
C5C O |
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2h3w | 1 | Q3V1Y3 | 90.94 | 0.0 |
X-RAY |
2006-08-01 | TYR | A:91 | A:117 | 55.0 | 0.239 | T | -82.6 | -14.0 | 55.0 | 0.239 | 0.0 |
HC5 HOH |
6.288 2.582 |
O OH |
CAT O |
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TYR | B:91 | B:117 | 49.0 | 0.213 | T | -77.2 | -20.2 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p43155-f1 | 1 | P43155 | 99.84 | 0.0 | TYR | A:117 | A:117 | 52.0 | 0.226 | T | -83.3 | -14.9 |