Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 140707848 . C A CCDS7050.2:NM_024757.4:c.3046Cga>Aga_NP_079033.4:p.1016R>R Homo sapiens euchromatic histone lysine methyltransferase 1 (EHMT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2igq 1 Q9H9B1 100.0 0.0 X-RAY
 2006-10-24 ARG A:35 A:985 126.0 0.56 T 56.4 46.8 35.0 0.156 0.404 B:Q9H9B1:0.404
 ZN
ZN
ZN
HOH
 8.937
8.121
9.974
2.993
 NH1
NH1
NH1
NH2
 ZN
ZN
ZN
O
ARG B:35 B:985 115.0 0.511 T 54.4 41.0 29.0 0.129 0.382 A:Q9H9B1:0.382
 ZN
ZN
HOH
 9.554
9.019
3.124
 NH1
NH1
NH1
 ZN
ZN
O
2rfi 1 Q9H9B1 100.0 0.0 X-RAY
 2007-10-23 ARG A:35 A:985 122.0 0.542 T 53.6 33.3 122.0 0.542 0.0 HOH
 2.607
 NH2
 O
ARG B:35 B:985 118.0 0.524 T 54.5 36.0 NA NA NA
3mo0 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 ARG A:35 A:985 130.0 0.578 T 58.8 28.9 130.0 0.578 0.0 HOH
 3.043
 NE
 O
ARG B:35 B:985 135.0 0.6 T 51.2 35.6 NA NA NA
3mo2 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 ARG A:35 A:985 207.0 0.92 T 51.2 35.5 207.0 0.92 0.0 HOH
 4.058
 NH2
 O
ARG B:35 B:985 127.0 0.564 T 47.9 42.9 NA NA NA
ARG C:35 C:985 128.0 0.569 T 44.5 35.2 NA NA NA
ARG D:35 D:985 188.0 0.836 T 49.6 35.7 NA NA NA
3mo5 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 ARG A:35 A:985 127.0 0.564 T 53.1 32.5 127.0 0.564 0.0 HOH
 2.809
 NH2
 O
ARG B:35 B:985 122.0 0.542 T 58.8 37.4 NA NA NA
ARG C:35 C:985 126.0 0.56 T 51.5 39.7 NA NA NA
ARG D:35 D:985 188.0 0.836 T 40.1 41.5 NA NA NA
3sw9 1 Q9H9B1 100.0 0.0 X-RAY
 2011-12-07 ARG A:35 A:985 125.0 0.556 T 52.0 41.4 125.0 0.556 0.0
ARG C:35 B:985 120.0 0.533 T 40.8 52.3 NA NA NA
3swc 1 Q9H9B1 100.0 0.0 X-RAY
 2011-11-30 ARG A:35 A:985 119.0 0.529 T 51.2 36.0 119.0 0.529 0.0 HOH
 3.971
 NH1
 O
ARG C:35 B:985 117.0 0.52 T 52.2 33.6 NA NA NA
3hna 1 Q9H9B1 100.0 0.0 X-RAY
 2009-06-09 ARG A:37 A:985 113.0 0.502 T 52.0 38.4 113.0 0.502 0.0 HOH
 2.502
 NH1
 O
ARG B:37 B:985 119.0 0.529 T 53.3 36.6 NA NA NA
5ttg 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-01 ARG A:37 A:1016 118.0 0.524 T 50.4 39.9 118.0 0.524 0.0 HOH
 4.698
 C
 O
ARG B:37 B:1016 124.0 0.551 T 52.6 39.3 NA NA NA
5v9j 1 Q9H9B1 100.0 0.0 X-RAY
 2018-03-21 ARG A:37 A:1016 119.0 0.529 T 50.8 42.4 30.0 0.133 0.396 B:Q9H9B1:0.396
 ZN
ZN
UNX
HOH
 9.165
8.763
7.168
2.776
 NH2
NE
O
NH1
 ZN
ZN
UNK
O
ARG B:37 B:1016 122.0 0.542 T 54.7 40.4 29.0 0.129 0.413 A:Q9H9B1:0.413
 ZN
ZN
UNX
HOH
 9.194
8.734
8.033
2.627
 NH2
NE
CB
NH1
 ZN
ZN
UNK
O
4i51 1 Q9H9B1 99.65 0.0 X-RAY
 2012-12-19 ARG A:36 A:985 120.0 0.533 T 50.5 40.6 29.0 0.129 0.404 C:Q9H9B1:0.404
 ZN
ZN
HOH
 9.148
8.824
2.478
 NH2
NE
NH1
 ZN
ZN
O
ARG C:36 B:985 121.0 0.538 T 54.1 35.5 30.0 0.133 0.405 A:Q9H9B1:0.404
 ZN
ZN
UNX
HOH
 9.345
8.875
7.095
2.567
 NH2
NE
O
NH1
 ZN
ZN
UNK
O
3fpd 1 Q9H9B1 100.0 0.0 X-RAY
 2009-02-17 ARG A:11 A:985 203.0 0.902 T 58.5 46.2 105.0 0.467 0.435 B:Q9H9B1:0.436
 ZN
HOH
 9.407
3.580
 O
CD
 ZN
O
ARG B:11 B:985 122.0 0.542 T 58.0 34.1 29.0 0.129 0.413 A:Q9H9B1:0.413
 ZN
ZN
HOH
 8.978
8.693
2.899
 NH1
NE
NH1
 ZN
ZN
O
5tuz 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-22 ARG A:11 A:1016 124.0 0.551 T 51.4 37.0 32.0 0.142 0.409 B:Q9H9B1:0.409
 ZN
ZN
HOH
 9.234
8.738
2.932
 NH2
NE
NH2
 ZN
ZN
O
ARG B:11 B:1016 121.0 0.538 T 49.1 43.6 36.0 0.16 0.378 A:Q9H9B1:0.378
 ZN
ZN
HOH
 9.682
9.052
3.144
 NH2
NE
NH1
 ZN
ZN
O
5vsd 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 ARG A:11 A:1016 150.0 0.667 T 50.4 38.4 43.0 0.191 0.476 B:Q9H9B1:0.476
 ZN
ZN
HOH
 9.494
8.830
3.088
 NH2
NE
NH1
 ZN
ZN
O
ARG B:11 B:1016 135.0 0.6 T 49.6 41.3 37.0 0.164 0.436 A:Q9H9B1:0.436
 ZN
ZN
ZN
HOH
 8.522
7.824
9.563
2.366
 NH1
NH1
NH1
NE
 ZN
ZN
ZN
O
5vsf 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 ARG A:11 A:1016 123.0 0.547 T 55.6 37.6 31.0 0.138 0.409 B:Q9H9B1:0.409
 ZN
ZN
HOH
 9.242
8.745
2.896
 NH2
NE
NH2
 ZN
ZN
O
ARG B:11 B:1016 118.0 0.524 T 54.1 38.2 34.0 0.151 0.373 A:Q9H9B1:0.373
 ZN
ZN
HOH
 9.172
8.839
2.934
 NH2
NE
NH2
 ZN
ZN
O
6mbo 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 ARG A:11 A:985 118.0 0.524 T 39.5 48.8 22.0 0.098 0.426 B:Q9H9B1:0.427
 EDO
HOH
 4.824
4.694
 C
C
 O1
O
ARG B:11 B:985 212.0 0.942 T 55.6 41.2 114.0 0.507 0.435 A:Q9H9B1:0.436
 HOH
 3.852
 CZ
 O
6mbp 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 ARG A:11 A:985 216.0 0.96 T 49.8 40.6 116.0 0.516 0.444 B:Q9H9B1:0.444
 EDO
EDO
EDO
ZN
EDO
EDO
HOH
 7.268
9.360
3.308
9.303
9.467
9.779
3.364
 O
NH1
CD
O
O
NH1
NE
 C1
O1
O2
ZN
C2
O1
O
ARG B:11 B:985 206.0 0.916 T 48.0 43.5 108.0 0.48 0.436 A:Q9H9B1:0.436
 HOH
 3.973
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h9b1-f1 1 Q9H9B1 100.0 0.0 ARG A:1016 A:1016 192.0 0.853 T 59.7 40.9