Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr9 | 140707861 | . | G | A | CCDS7050.2:NM_024757.4:c.3059cGc>cAc_NP_079033.4:p.1020R>H | Homo sapiens euchromatic histone lysine methyltransferase 1 (EHMT1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 2igq | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2006-10-24 | ARG | A:39 | A:989 | 135.0 | 0.6 | S | -66.2 | -29.1 | 135.0 | 0.6 | 0.0 |
HOH |
2.770 |
N |
O |
||
| ARG | B:39 | B:989 | 164.0 | 0.729 | S | -56.3 | -29.1 | 164.0 | 0.729 | 0.0 |
HOH |
3.004 |
NH2 |
O |
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| 2rfi | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2007-10-23 | ARG | A:39 | A:989 | 134.0 | 0.596 | S | -66.8 | -26.0 | 134.0 | 0.596 | 0.0 |
HOH |
2.884 |
N |
O |
||
| ARG | B:39 | B:989 | 143.0 | 0.636 | S | -62.9 | -32.1 | NA | NA | NA | |||||||||||||
| 3mo0 | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2010-06-30 | ARG | A:39 | A:989 | 134.0 | 0.596 | S | -58.9 | -30.6 | 134.0 | 0.596 | 0.0 |
HOH |
4.813 |
N |
O |
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| ARG | B:39 | B:989 | 173.0 | 0.769 | S | -78.7 | -26.7 | NA | NA | NA | |||||||||||||
| 3mo2 | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2010-06-30 | ARG | A:39 | A:989 | 191.0 | 0.849 | S | -72.5 | -20.5 | 191.0 | 0.849 | 0.0 |
HOH |
3.085 |
N |
O |
||
| ARG | B:39 | B:989 | 156.0 | 0.693 | S | -68.8 | -26.2 | NA | NA | NA | |||||||||||||
| ARG | C:39 | C:989 | 182.0 | 0.809 | S | -71.1 | -9.1 | NA | NA | NA | |||||||||||||
| ARG | D:39 | D:989 | 168.0 | 0.747 | S | -63.0 | -25.5 | NA | NA | NA | |||||||||||||
| 3mo5 | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2010-06-30 | ARG | A:39 | A:989 | 147.0 | 0.653 | S | -66.8 | -25.2 | 147.0 | 0.653 | 0.0 |
HOH |
3.056 |
N |
O |
||
| ARG | B:39 | B:989 | 152.0 | 0.676 | S | -69.9 | -18.1 | NA | NA | NA | |||||||||||||
| ARG | C:39 | C:989 | 155.0 | 0.689 | S | -67.9 | -22.9 | NA | NA | NA | |||||||||||||
| ARG | D:39 | D:989 | 177.0 | 0.787 | S | -63.3 | -23.3 | NA | NA | NA | |||||||||||||
| 3sw9 | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2011-12-07 | ARG | A:39 | A:989 | 154.0 | 0.684 | S | -54.6 | -43.6 | 154.0 | 0.684 | 0.0 | ||||||
| ARG | C:39 | B:989 | 149.0 | 0.662 | S | -67.3 | -41.7 | NA | NA | NA | |||||||||||||
| 3swc | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2011-11-30 | ARG | A:39 | A:989 | 143.0 | 0.636 | S | -66.3 | -26.6 | 143.0 | 0.636 | 0.0 |
HOH |
2.895 |
N |
O |
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| ARG | C:39 | B:989 | 145.0 | 0.644 | S | -67.5 | -28.5 | NA | NA | NA | |||||||||||||
| 3hna | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2009-06-09 | ARG | A:41 | A:989 | 149.0 | 0.662 | S | -65.5 | -28.1 | 149.0 | 0.662 | 0.0 |
HOH |
2.915 |
N |
O |
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| ARG | B:41 | B:989 | 144.0 | 0.64 | S | -67.6 | -22.1 | NA | NA | NA | |||||||||||||
| 5ttg | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2017-02-01 | ARG | A:41 | A:1020 | 131.0 | 0.582 | S | -55.1 | -37.1 | 131.0 | 0.582 | 0.0 |
CL HOH |
6.561 2.684 |
NH2 O |
CL O |
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| ARG | B:41 | B:1020 | 120.0 | NA | S | -65.4 | -25.3 | NA | NA | NA | |||||||||||||
| 5v9j | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2018-03-21 | ARG | A:41 | A:1020 | 130.0 | 0.578 | S | -52.7 | -41.8 | 130.0 | 0.578 | 0.0 |
CL HOH |
6.456 2.769 |
NH2 NE |
CL O |
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| ARG | B:41 | B:1020 | 153.0 | 0.68 | S | -59.8 | -27.2 | 153.0 | 0.68 | 0.0 |
UNX HOH |
6.809 2.712 |
NH1 NH2 |
UNK O |
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| 4i51 | 1 | Q9H9B1 | 99.65 | 0.0 |
X-RAY |
2012-12-19 | ARG | A:40 | A:989 | 132.0 | 0.587 | S | -65.1 | -24.7 | 132.0 | 0.587 | 0.0 |
HOH |
2.810 |
N |
O |
||
| ARG | C:40 | B:989 | 128.0 | 0.569 | S | -78.0 | -16.5 | 128.0 | 0.569 | 0.0 |
HOH |
2.901 |
N |
O |
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| 3fpd | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2009-02-17 | ARG | A:15 | A:989 | 142.0 | 0.631 | S | -70.6 | -25.3 | 142.0 | 0.631 | 0.0 |
HOH |
2.924 |
N |
O |
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| ARG | B:15 | B:989 | 161.0 | 0.716 | S | -59.7 | -29.1 | 161.0 | 0.716 | 0.0 |
HOH |
3.858 |
O |
O |
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| 5tuz | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2017-02-22 | ARG | A:15 | A:1020 | 154.0 | 0.684 | S | -69.3 | -23.4 | 154.0 | 0.684 | 0.0 |
HOH |
3.044 |
N |
O |
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| ARG | B:15 | B:1020 | 129.0 | 0.573 | S | -57.3 | -35.1 | 129.0 | 0.573 | 0.0 |
HOH |
2.649 |
NE |
O |
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| 5vsd | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2017-07-12 | ARG | A:15 | A:1020 | 154.0 | 0.684 | S | -61.3 | -31.7 | 154.0 | 0.684 | 0.0 |
HOH |
2.233 |
NH2 |
O |
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| ARG | B:15 | B:1020 | 130.0 | 0.578 | S | -61.0 | -33.2 | 130.0 | 0.578 | 0.0 |
HOH |
2.693 |
O |
O |
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| 5vsf | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2017-07-12 | ARG | A:15 | A:1020 | 150.0 | 0.667 | S | -66.4 | -26.2 | 150.0 | 0.667 | 0.0 |
HOH |
2.980 |
N |
O |
||
| ARG | B:15 | B:1020 | 131.0 | 0.582 | S | -65.6 | -29.6 | 131.0 | 0.582 | 0.0 |
HOH |
2.777 |
N |
O |
|||||||||
| 6mbo | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2019-02-27 | ARG | A:15 | A:989 | 162.0 | 0.72 | S | -62.9 | -21.7 | 162.0 | 0.72 | 0.0 |
EDO EDO HOH |
7.647 7.284 2.840 |
O O N |
O2 C2 O |
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| ARG | B:15 | B:989 | 130.0 | 0.578 | S | -62.3 | -31.4 | 130.0 | 0.578 | 0.0 |
EDO HOH |
7.645 2.984 |
CD N |
O2 O |
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| 6mbp | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2019-02-27 | ARG | A:15 | A:989 | 140.0 | 0.622 | S | -63.8 | -21.9 | 140.0 | 0.622 | 0.0 |
EDO HOH |
3.550 2.956 |
N N |
O2 O |
||
| ARG | B:15 | B:989 | 159.0 | 0.707 | S | -66.6 | -22.4 | 159.0 | 0.707 | 0.0 |
EDO EDO HOH |
8.041 5.802 2.728 |
NH2 NH1 O |
C2 C1 O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q9h9b1-f1 | 1 | Q9H9B1 | 100.0 | 0.0 | ARG | A:1020 | A:1020 | 133.0 | 0.591 | S | -62.1 | -20.2 | |