Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 140707929 . C A CCDS7050.2:NM_024757.4:c.3127Cag>Aag_NP_079033.4:p.1043Q>K Homo sapiens euchromatic histone lysine methyltransferase 1 (EHMT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2igq 1 Q9H9B1 100.0 0.0 X-RAY
 2006-10-24 GLN A:62 A:1012 144.0 0.8 S -134.4 151.2 144.0 0.8 0.0 HOH
 2.714
 O
 O
GLN B:62 B:1012 140.0 0.778 S -133.3 152.6 140.0 0.778 0.0 HOH
 2.753
 O
 O
2rfi 1 Q9H9B1 100.0 0.0 X-RAY
 2007-10-23 GLN A:62 A:1012 143.0 0.794 S -134.8 153.8 143.0 0.794 0.0 HOH
 2.789
 O
 O
GLN B:62 B:1012 142.0 0.789 S -135.1 157.0 NA NA NA
3mo0 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 GLN A:62 A:1012 60.0 NA S -125.4 153.6 60.0 NA NA HOH
 4.467
 N
 O
GLN B:62 B:1012 111.0 0.617 S -147.2 152.2 NA NA NA
3mo2 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 GLN A:62 A:1012 102.0 0.567 S -127.9 149.7 102.0 0.567 0.0 HOH
 2.903
 O
 O
GLN B:62 B:1012 125.0 0.694 S -142.8 151.2 NA NA NA
GLN C:62 C:1012 131.0 0.728 S -116.5 157.9 NA NA NA
GLN D:62 D:1012 112.0 0.622 S -119.5 156.2 NA NA NA
3mo5 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 GLN A:62 A:1012 103.0 0.572 S -130.7 154.1 103.0 0.572 0.0 HOH
 2.695
 NE2
 O
GLN B:62 B:1012 131.0 0.728 S -135.5 154.5 NA NA NA
GLN C:62 C:1012 129.0 0.717 S -130.0 151.7 NA NA NA
GLN D:62 D:1012 110.0 0.611 S -128.0 156.7 NA NA NA
3sw9 1 Q9H9B1 100.0 0.0 X-RAY
 2011-12-07 GLN A:62 A:1012 135.0 0.75 S -125.8 167.9 135.0 0.75 0.0 HOH
 5.853
 OE1
 O
GLN C:62 B:1012 136.0 0.756 S -121.6 159.3 NA NA NA
3swc 1 Q9H9B1 100.0 0.0 X-RAY
 2011-11-30 GLN A:62 A:1012 140.0 0.778 S -135.9 156.9 140.0 0.778 0.0 HOH
 3.060
 O
 O
GLN C:62 B:1012 144.0 0.8 S -135.2 151.8 NA NA NA
3hna 1 Q9H9B1 100.0 0.0 X-RAY
 2009-06-09 GLN A:64 A:1012 141.0 0.783 S -136.7 156.2 141.0 0.783 0.0 HOH
 2.723
 OE1
 O
GLN B:64 B:1012 145.0 0.806 S -133.4 156.0 NA NA NA
5ttg 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-01 GLN A:64 A:1043 143.0 0.794 S -132.8 154.7 143.0 0.794 0.0 GOL
HOH
 6.122
2.740
 C
O
 O1
O
GLN B:64 B:1043 142.0 0.789 S -133.0 154.1 NA NA NA
5v9j 1 Q9H9B1 100.0 0.0 X-RAY
 2018-03-21 GLN A:64 A:1043 140.0 0.778 S -135.4 159.3 140.0 0.778 0.0 HOH
 2.737
 O
 O
GLN B:64 B:1043 142.0 0.789 S -132.8 153.3 142.0 0.789 0.0 CL
CL
HOH
 8.440
6.859
3.710
 OE1
OE1
OE1
 CL
CL
O
4i51 1 Q9H9B1 99.65 0.0 X-RAY
 2012-12-19 GLN A:63 A:1012 142.0 0.789 S -140.3 160.1 132.0 0.733 0.056 C:Q9H9B1:0.056
 GOL
UNX
HOH
 6.239
8.548
2.532
 C
NE2
NE2
 O2
UNK
O
GLN C:63 B:1012 140.0 0.778 S -140.9 158.3 140.0 0.778 0.0 GOL
GOL
UNX
HOH
 9.624
5.486
6.043
2.883
 NE2
NE2
NE2
O
 O1
C3
UNK
O
3fpd 1 Q9H9B1 100.0 0.0 X-RAY
 2009-02-17 GLN A:38 A:1012 133.0 0.739 S -139.3 151.8 133.0 0.739 0.0 HOH
 3.136
 CB
 O
GLN B:38 B:1012 129.0 0.717 S -138.7 149.7 129.0 0.717 0.0 HOH
 2.820
 O
 O
5tuz 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-22 GLN A:38 A:1043 141.0 0.783 S -133.8 154.7 141.0 0.783 0.0 HOH
 2.809
 O
 O
GLN B:38 B:1043 141.0 0.783 S -130.8 158.6 141.0 0.783 0.0 EDO
HOH
 6.585
2.849
 C
O
 O2
O
5vsd 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 GLN A:38 A:1043 135.0 0.75 S -133.5 155.8 135.0 0.75 0.0 HOH
 2.795
 O
 O
GLN B:38 B:1043 136.0 0.756 S -132.3 156.9 136.0 0.756 0.0 GOL
GOL
HOH
 6.690
6.069
3.432
 C
C
CG
 O3
O1
O
5vsf 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 GLN A:38 A:1043 141.0 0.783 S -136.0 159.1 140.0 0.778 0.005 B:Q9H9B1:0.006
 GOL
GOL
HOH
 5.651
9.956
2.760
 OE1
OE1
O
 O1
O2
O
GLN B:38 B:1043 141.0 0.783 S -133.8 157.3 141.0 0.783 0.0 GOL
GOL
HOH
 9.028
6.568
2.747
 OE1
C
O
 O1
O1
O
6mbo 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 GLN A:38 A:1012 138.0 0.767 S -137.9 159.6 134.0 0.744 0.023 B:Q9H9B1:0.022
 EDO
HOH
 5.754
2.887
 C
O
 O2
O
GLN B:38 B:1012 139.0 0.772 S -138.8 160.3 137.0 0.761 0.011 A:Q9H9B1:0.011
 EDO
EDO
HOH
 5.471
5.780
2.840
 OE1
C
O
 O1
O1
O
6mbp 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 GLN A:38 A:1012 136.0 0.756 S -145.7 162.4 135.0 0.75 0.006 B:Q9H9B1:0.006
 EDO
EDO
EDO
EDO
HOH
 5.745
8.303
9.276
6.208
2.755
 C
OE1
N
NE2
O
 O1
O1
C1
C1
O
GLN B:38 B:1012 142.0 0.789 S -133.4 155.9 142.0 0.789 0.0 EDO
HOH
 9.751
2.831
 NE2
O
 O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h9b1-f1 1 Q9H9B1 100.0 0.0 GLN A:1043 A:1043 135.0 0.75 S -144.0 152.2