Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr9 | 140707938 | . | G | A | CCDS7050.2:NM_024757.4:c.3136Gtg>Atg_NP_079033.4:p.1046V>M | Homo sapiens euchromatic histone lysine methyltransferase 1 (EHMT1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 2igq | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2006-10-24 | VAL | A:65 | A:1015 | 74.0 | 0.477 | E | -124.6 | 160.9 | 24.0 | 0.155 | 0.322 |
B:Q9H9B1:0.323 |
HOH |
2.840 |
N |
O |
|
| VAL | B:65 | B:1015 | 68.0 | 0.439 | -127.6 | 161.6 | 22.0 | 0.142 | 0.297 |
A:Q9H9B1:0.297 |
HOH |
2.873 |
N |
O |
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| 2rfi | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2007-10-23 | VAL | A:65 | A:1015 | 68.0 | 0.439 | -133.1 | 157.9 | 68.0 | 0.439 | 0.0 |
HOH |
3.642 |
CB |
O |
|||
| VAL | B:65 | B:1015 | 70.0 | 0.452 | -133.3 | 156.6 | NA | NA | NA | ||||||||||||||
| 3mo0 | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2010-06-30 | VAL | A:65 | A:1015 | 114.0 | 0.735 | E | -90.2 | 92.7 | 114.0 | 0.735 | 0.0 |
HOH |
4.870 |
CG1 |
O |
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| VAL | B:65 | B:1015 | 83.0 | 0.535 | -63.6 | -27.3 | NA | NA | NA | ||||||||||||||
| 3mo2 | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2010-06-30 | VAL | A:65 | A:1015 | 66.0 | 0.426 | -128.9 | 147.4 | 66.0 | 0.426 | 0.0 |
HOH |
3.768 |
CG1 |
O |
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| VAL | B:65 | B:1015 | 62.0 | 0.4 | E | -131.0 | 155.3 | NA | NA | NA | |||||||||||||
| VAL | C:65 | C:1015 | 68.0 | 0.439 | -131.6 | 158.1 | NA | NA | NA | ||||||||||||||
| VAL | D:65 | D:1015 | 61.0 | 0.394 | -139.9 | 144.9 | NA | NA | NA | ||||||||||||||
| 3mo5 | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2010-06-30 | VAL | A:65 | A:1015 | 63.0 | 0.406 | -128.1 | 152.5 | 63.0 | 0.406 | 0.0 |
HOH |
3.615 |
CB |
O |
|||
| VAL | B:65 | B:1015 | 63.0 | 0.406 | -128.6 | 154.4 | NA | NA | NA | ||||||||||||||
| VAL | C:65 | C:1015 | 64.0 | 0.413 | -131.5 | 154.4 | NA | NA | NA | ||||||||||||||
| VAL | D:65 | D:1015 | 64.0 | 0.413 | -132.7 | 147.6 | NA | NA | NA | ||||||||||||||
| 3sw9 | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2011-12-07 | VAL | A:65 | A:1015 | 67.0 | 0.432 | E | -123.7 | 156.6 | 67.0 | 0.432 | 0.0 | ||||||
| VAL | C:65 | B:1015 | 69.0 | 0.445 | E | -135.0 | 160.0 | NA | NA | NA | |||||||||||||
| 3swc | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2011-11-30 | VAL | A:65 | A:1015 | 70.0 | 0.452 | -123.7 | 152.8 | 70.0 | 0.452 | 0.0 |
HOH |
3.680 |
CB |
O |
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| VAL | C:65 | B:1015 | 68.0 | 0.439 | E | -130.7 | 159.8 | NA | NA | NA | |||||||||||||
| 3hna | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2009-06-09 | VAL | A:67 | A:1015 | 72.0 | 0.465 | E | -130.2 | 158.6 | 72.0 | 0.465 | 0.0 |
HOH |
3.692 |
CB |
O |
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| VAL | B:67 | B:1015 | 69.0 | 0.445 | E | -132.3 | 156.7 | NA | NA | NA | |||||||||||||
| 5ttg | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2017-02-01 | VAL | A:67 | A:1046 | 68.0 | 0.439 | -130.5 | 155.7 | 68.0 | 0.439 | 0.0 |
GOL UNX UNX HOH |
6.784 9.296 4.574 3.732 |
CG1 CG1 N CB |
C1 UNK UNK O |
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| VAL | B:67 | B:1046 | 69.0 | 0.445 | -131.6 | 156.2 | NA | NA | NA | ||||||||||||||
| 5v9j | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2018-03-21 | VAL | A:67 | A:1046 | 67.0 | 0.432 | -132.7 | 155.8 | 20.0 | 0.129 | 0.303 |
B:Q9H9B1:0.303 |
CL UNX HOH |
9.845 4.345 2.901 |
CG1 CG1 N |
CL UNK O |
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| VAL | B:67 | B:1046 | 68.0 | 0.439 | -131.0 | 154.3 | 19.0 | 0.123 | 0.316 |
A:Q9H9B1:0.316 |
CL UNX UNX HOH |
9.810 4.354 3.989 2.935 |
CG1 CG1 CG2 N |
CL UNK UNK O |
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| 4i51 | 1 | Q9H9B1 | 99.65 | 0.0 |
X-RAY |
2012-12-19 | VAL | A:66 | A:1015 | 68.0 | 0.439 | E | -130.4 | 156.8 | 23.0 | 0.148 | 0.291 |
C:Q9H9B1:0.29 |
GOL UNX HOH |
4.021 3.958 2.893 |
CG2 CG2 N |
C3 UNK O |
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| VAL | C:66 | B:1015 | 68.0 | 0.439 | -127.9 | 157.2 | 23.0 | 0.148 | 0.291 |
A:Q9H9B1:0.29 |
GOL GOL UNX HOH |
9.347 4.322 9.333 2.958 |
CG2 CG1 CG1 N |
O1 O2 UNK O |
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| 3fpd | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2009-02-17 | VAL | A:41 | A:1015 | 71.0 | 0.458 | E | -146.1 | 157.5 | 20.0 | 0.129 | 0.329 |
B:Q9H9B1:0.329 |
HOH |
2.830 |
N |
O |
|
| VAL | B:41 | B:1015 | 68.0 | 0.439 | -143.3 | 152.2 | 19.0 | 0.123 | 0.316 |
A:Q9H9B1:0.316 |
HOH |
4.098 |
CG2 |
O |
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| 5tuz | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2017-02-22 | VAL | A:41 | A:1046 | 66.0 | 0.426 | -130.4 | 157.7 | 21.0 | 0.135 | 0.291 |
B:Q9H9B1:0.29 |
HOH |
2.911 |
N |
O |
||
| VAL | B:41 | B:1046 | 67.0 | 0.432 | -135.0 | 156.8 | 21.0 | 0.135 | 0.297 |
A:Q9H9B1:0.297 |
EDO HOH |
3.985 2.926 |
CG1 N |
C2 O |
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| 5vsd | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2017-07-12 | VAL | A:41 | A:1046 | 70.0 | 0.452 | -134.9 | 154.6 | 23.0 | 0.148 | 0.304 |
B:Q9H9B1:0.303 |
HOH |
2.870 |
N |
O |
||
| VAL | B:41 | B:1046 | 69.0 | 0.445 | -134.8 | 155.2 | 22.0 | 0.142 | 0.303 |
A:Q9H9B1:0.303 |
GOL GOL HOH |
4.008 7.061 2.917 |
N CG1 N |
C1 C1 O |
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| 5vsf | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2017-07-12 | VAL | A:41 | A:1046 | 71.0 | 0.458 | -131.7 | 154.9 | 25.0 | 0.161 | 0.297 |
B:Q9H9B1:0.297 |
GOL GOL HOH |
3.901 8.922 2.962 |
CG1 CG2 N |
O2 O3 O |
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| VAL | B:41 | B:1046 | 69.0 | 0.445 | -132.3 | 155.5 | 24.0 | 0.155 | 0.29 |
A:Q9H9B1:0.29 |
GOL HOH |
3.953 2.904 |
CG1 N |
C1 O |
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| 6mbo | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2019-02-27 | VAL | A:41 | A:1015 | 68.0 | 0.439 | -136.2 | 154.6 | 19.0 | 0.123 | 0.316 |
B:Q9H9B1:0.316 |
EDO HOH |
7.056 2.988 |
CG1 N |
C1 O |
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| VAL | B:41 | B:1015 | 68.0 | 0.439 | -135.7 | 153.9 | 19.0 | 0.123 | 0.316 |
A:Q9H9B1:0.316 |
JDG EDO EDO HOH |
8.265 3.910 6.783 2.969 |
O CG1 CG1 N |
C36 C2 C1 O |
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| 6mbp | 1 | Q9H9B1 | 100.0 | 0.0 |
X-RAY |
2019-02-27 | VAL | A:41 | A:1015 | 67.0 | 0.432 | -134.8 | 155.1 | 21.0 | 0.135 | 0.297 |
B:Q9H9B1:0.297 |
EDO EDO HOH |
6.955 8.845 2.948 |
CG1 O N |
C2 O2 O |
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| VAL | B:41 | B:1015 | 68.0 | 0.439 | -131.3 | 154.1 | 20.0 | 0.129 | 0.31 |
A:Q9H9B1:0.31 |
EDO HOH |
8.665 2.956 |
O N |
C1 O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q9h9b1-f1 | 1 | Q9H9B1 | 100.0 | 0.0 | VAL | A:1046 | A:1046 | 75.0 | 0.484 | -138.1 | 138.6 | ||