Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 140708920 . G A CCDS7050.2:NM_024757.4:c.3218tGc>tAc_NP_079033.4:p.1073C>Y Homo sapiens euchromatic histone lysine methyltransferase 1 (EHMT1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2igq 1 Q9H9B1 100.0 0.0 X-RAY
2006-10-24 CYS A:92 A:1042 2.0 0.015 -60.8 116.8 2.0 0.015 0.0 ZN
ZN
ZN
HOH
4.215
4.926
2.225
3.088
SG
SG
SG
SG
ZN
ZN
ZN
O
CYS B:92 B:1042 3.0 0.022 -59.0 116.2 3.0 0.022 0.0 ZN
ZN
ZN
HOH
4.336
5.015
2.303
2.926
SG
SG
SG
O
ZN
ZN
ZN
O
2rfi 1 Q9H9B1 100.0 0.0 X-RAY
2007-10-23 CYS A:92 A:1042 4.0 0.03 -69.0 119.0 4.0 0.03 0.0 ZN
ZN
ZN
HOH
4.387
5.034
2.360
2.765
SG
SG
SG
O
ZN
ZN
ZN
O
CYS B:92 B:1042 2.0 0.015 -61.4 119.1 NA NA NA
3mo0 1 Q9H9B1 100.0 0.0 X-RAY
2010-06-30 CYS A:92 A:1042 2.0 0.015 -76.7 117.3 2.0 0.015 0.0 ZN
ZN
ZN
HOH
4.355
4.897
2.411
8.501
SG
SG
SG
C
ZN
ZN
ZN
O
CYS B:92 B:1042 6.0 0.044 -61.3 103.6 NA NA NA
3mo2 1 Q9H9B1 100.0 0.0 X-RAY
2010-06-30 CYS A:92 A:1042 5.0 0.037 -39.0 116.0 5.0 0.037 0.0 ZN
ZN
ZN
HOH
4.295
5.016
2.319
3.687
SG
SG
SG
CB
ZN
ZN
ZN
O
CYS B:92 B:1042 3.0 0.022 -65.6 111.3 NA NA NA
CYS C:92 C:1042 4.0 0.03 -62.2 116.5 NA NA NA
CYS D:92 D:1042 4.0 0.03 -49.7 116.6 NA NA NA
3mo5 1 Q9H9B1 100.0 0.0 X-RAY
2010-06-30 CYS A:92 A:1042 4.0 0.03 -53.9 113.4 4.0 0.03 0.0 ZN
ZN
ZN
HOH
4.305
4.990
2.341
2.890
SG
SG
SG
O
ZN
ZN
ZN
O
CYS B:92 B:1042 4.0 0.03 -78.7 111.2 NA NA NA
CYS C:92 C:1042 4.0 0.03 -65.4 109.5 NA NA NA
CYS D:92 D:1042 3.0 0.022 -58.0 114.3 NA NA NA
3sw9 1 Q9H9B1 100.0 0.0 X-RAY
2011-12-07 CYS A:92 A:1042 4.0 0.03 -58.1 119.1 4.0 0.03 0.0 ZN
ZN
ZN
HOH
4.420
5.076
2.492
6.195
SG
SG
SG
N
ZN
ZN
ZN
O
CYS C:92 B:1042 3.0 0.022 -70.0 119.2 NA NA NA
3swc 1 Q9H9B1 100.0 0.0 X-RAY
2011-11-30 CYS A:92 A:1042 3.0 0.022 -54.3 113.8 3.0 0.022 0.0 ZN
ZN
ZN
HOH
4.218
5.065
2.359
3.241
SG
SG
SG
SG
ZN
ZN
ZN
O
CYS C:92 B:1042 3.0 0.022 -70.7 115.7 NA NA NA
3hna 1 Q9H9B1 100.0 0.0 X-RAY
2009-06-09 CYS A:94 A:1042 2.0 0.015 -81.1 113.6 2.0 0.015 0.0 ZN
ZN
ZN
HOH
4.234
4.998
2.340
2.798
SG
SG
SG
O
ZN
ZN
ZN
O
CYS B:94 B:1042 3.0 0.022 -58.5 118.5 NA NA NA
5ttg 1 Q9H9B1 100.0 0.0 X-RAY
2017-02-01 CYS A:94 A:1073 2.0 0.015 -62.4 120.8 2.0 0.015 0.0 ZN
ZN
ZN
HOH
4.278
4.970
2.303
3.205
SG
SG
SG
SG
ZN
ZN
ZN
O
CYS B:94 B:1073 4.0 0.03 -66.1 118.6 NA NA NA
5v9j 1 Q9H9B1 100.0 0.0 X-RAY
2018-03-21 CYS A:94 A:1073 2.0 0.015 -60.6 116.8 2.0 0.015 0.0 ZN
ZN
ZN
HOH
4.305
4.988
2.319
3.166
SG
SG
SG
SG
ZN
ZN
ZN
O
CYS B:94 B:1073 4.0 0.03 -62.9 119.0 4.0 0.03 0.0 ZN
ZN
ZN
DMS
HOH
4.333
5.046
2.328
5.336
2.772
SG
SG
SG
N
O
ZN
ZN
ZN
S
O
4i51 1 Q9H9B1 99.65 0.0 X-RAY
2012-12-19 CYS A:93 A:1042 3.0 0.022 -58.3 116.7 3.0 0.022 0.0 ZN
ZN
ZN
GOL
UNX
HOH
4.271
5.079
2.308
5.291
8.542
3.167
SG
SG
SG
N
O
O
ZN
ZN
ZN
O3
UNK
O
CYS C:93 B:1042 1.0 0.007 -69.5 116.3 1.0 0.007 0.0 ZN
ZN
ZN
HOH
4.268
5.016
2.332
3.002
SG
SG
SG
O
ZN
ZN
ZN
O
3fpd 1 Q9H9B1 100.0 0.0 X-RAY
2009-02-17 CYS A:68 A:1042 4.0 0.03 -58.4 114.0 4.0 0.03 0.0 ZN
ZN
ZN
HOH
4.281
5.107
2.518
3.257
SG
SG
SG
SG
ZN
ZN
ZN
O
CYS B:68 B:1042 3.0 0.022 -67.6 115.5 3.0 0.022 0.0 ZN
ZN
ZN
HOH
4.225
5.053
2.396
3.649
SG
SG
SG
N
ZN
ZN
ZN
O
5tuz 1 Q9H9B1 100.0 0.0 X-RAY
2017-02-22 CYS A:68 A:1073 2.0 0.015 -62.3 117.3 2.0 0.015 0.0 ZN
ZN
ZN
EDO
HOH
4.331
5.018
2.325
5.414
3.282
SG
SG
SG
N
SG
ZN
ZN
ZN
O2
O
CYS B:68 B:1073 2.0 0.015 -67.0 117.9 2.0 0.015 0.0 ZN
ZN
ZN
HOH
4.298
4.993
2.354
3.174
SG
SG
SG
SG
ZN
ZN
ZN
O
5vsd 1 Q9H9B1 100.0 0.0 X-RAY
2017-07-12 CYS A:68 A:1073 4.0 0.03 -69.2 125.6 4.0 0.03 0.0 ZN
ZN
ZN
DIO
HOH
4.418
5.104
2.420
5.685
2.646
SG
SG
SG
N
O
ZN
ZN
ZN
C2
O
CYS B:68 B:1073 2.0 0.015 -70.4 125.4 2.0 0.015 0.0 ZN
ZN
ZN
HOH
4.201
4.933
2.328
3.228
SG
SG
SG
SG
ZN
ZN
ZN
O
5vsf 1 Q9H9B1 100.0 0.0 X-RAY
2017-07-12 CYS A:68 A:1073 5.0 0.037 -71.5 119.1 5.0 0.037 0.0 ZN
ZN
ZN
DIO
HOH
4.420
5.054
2.335
5.526
2.736
SG
SG
SG
N
O
ZN
ZN
ZN
C2'
O
CYS B:68 B:1073 2.0 0.015 -71.6 119.3 2.0 0.015 0.0 ZN
ZN
ZN
HOH
4.260
5.023
2.306
3.205
SG
SG
SG
SG
ZN
ZN
ZN
O
6mbo 1 Q9H9B1 100.0 0.0 X-RAY
2019-02-27 CYS A:68 A:1042 4.0 0.03 -63.5 121.6 4.0 0.03 0.0 ZN
ZN
ZN
EDO
HOH
5.025
4.308
2.334
5.473
3.049
SG
SG
SG
N
O
ZN
ZN
ZN
O2
O
CYS B:68 B:1042 3.0 0.022 -63.7 120.1 3.0 0.022 0.0 ZN
ZN
ZN
HOH
2.333
5.008
4.316
3.087
SG
SG
SG
O
ZN
ZN
ZN
O
6mbp 1 Q9H9B1 100.0 0.0 X-RAY
2019-02-27 CYS A:68 A:1042 4.0 0.03 -63.4 120.1 4.0 0.03 0.0 ZN
ZN
ZN
EDO
HOH
4.945
4.277
2.247
5.323
2.721
SG
SG
SG
N
O
ZN
ZN
ZN
O2
O
CYS B:68 B:1042 4.0 0.03 -67.7 119.5 4.0 0.03 0.0 ZN
ZN
ZN
EDO
HOH
2.314
5.004
4.281
5.175
3.264
SG
SG
SG
N
SG
ZN
ZN
ZN
O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h9b1-f1 1 Q9H9B1 100.0 0.0 CYS A:1073 A:1073 2.0 0.015 -68.0 102.0