Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 140708954 . C A CCDS7050.2:NM_024757.4:c.3252taC>taA_NP_079033.4:p.1084Y>* Homo sapiens euchromatic histone lysine methyltransferase 1 (EHMT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2igq 1 Q9H9B1 100.0 0.0 X-RAY
 2006-10-24 TYR A:103 A:1053 1.0 0.004 B -99.3 131.9 1.0 0.004 0.0 ZN
HOH
 9.286
2.512
 CD2
O
 ZN
O
TYR B:103 B:1053 4.0 0.017 B -96.0 137.0 4.0 0.017 0.0 ZN
HOH
 9.438
2.276
 CD2
O
 ZN
O
2rfi 1 Q9H9B1 100.0 0.0 X-RAY
 2007-10-23 TYR A:103 A:1053 2.0 0.009 B -97.7 134.7 2.0 0.009 0.0 ZN
HOH
 9.328
2.520
 CD2
O
 ZN
O
TYR B:103 B:1053 1.0 0.004 B -96.6 130.7 NA NA NA
3mo0 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 TYR A:103 A:1053 9.0 0.039 B -85.3 130.3 9.0 0.039 0.0 ZN
 9.344
 CD2
 ZN
TYR B:103 NA:NA DO NA DO DO DO NA NA NA
3mo2 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 TYR A:103 A:1053 4.0 0.017 B -86.4 146.0 4.0 0.017 0.0 ZN
HOH
 9.446
4.143
 CD2
CE2
 ZN
O
TYR B:103 B:1053 3.0 0.013 B -96.7 129.6 NA NA NA
TYR C:103 C:1053 3.0 0.013 B -93.9 138.1 NA NA NA
TYR D:103 D:1053 5.0 0.022 B -109.3 147.7 NA NA NA
3mo5 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 TYR A:103 A:1053 3.0 0.013 B -92.5 137.5 3.0 0.013 0.0 ZN
HOH
 9.359
2.786
 CD2
O
 ZN
O
TYR B:103 B:1053 4.0 0.017 B -96.1 138.5 NA NA NA
TYR C:103 C:1053 3.0 0.013 B -96.9 134.6 NA NA NA
TYR D:103 D:1053 7.0 0.03 B -97.0 148.7 NA NA NA
3sw9 1 Q9H9B1 100.0 0.0 X-RAY
 2011-12-07 TYR A:103 A:1053 3.0 0.013 B -85.8 128.6 3.0 0.013 0.0 ZN
HOH
 9.488
5.881
 CD2
CD1
 ZN
O
TYR C:103 B:1053 3.0 0.013 B -89.3 134.2 NA NA NA
3swc 1 Q9H9B1 100.0 0.0 X-RAY
 2011-11-30 TYR A:103 A:1053 4.0 0.017 B -92.4 135.5 4.0 0.017 0.0 ZN
HOH
 9.410
5.891
 CD2
CD1
 ZN
O
TYR C:103 B:1053 2.0 0.009 B -105.2 134.4 NA NA NA
3hna 1 Q9H9B1 100.0 0.0 X-RAY
 2009-06-09 TYR A:105 A:1053 4.0 0.017 B -95.3 130.4 4.0 0.017 0.0 ZN
HOH
 9.354
2.651
 CD2
O
 ZN
O
TYR B:105 B:1053 4.0 0.017 B -96.9 136.1 NA NA NA
5ttg 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-01 TYR A:105 A:1084 1.0 0.004 B -98.6 134.9 1.0 0.004 0.0 ZN
CL
HOH
 9.330
7.768
2.752
 CD2
CD2
O
 ZN
CL
O
TYR B:105 B:1084 3.0 0.013 B -97.4 133.3 NA NA NA
5v9j 1 Q9H9B1 100.0 0.0 X-RAY
 2018-03-21 TYR A:105 A:1084 3.0 0.013 B -96.9 135.2 3.0 0.013 0.0 ZN
CL
UNX
HOH
 9.322
7.864
9.455
2.732
 CD2
CD2
CA
O
 ZN
CL
UNK
O
TYR B:105 B:1084 6.0 0.026 B -99.5 132.6 6.0 0.026 0.0 ZN
UNX
HOH
 9.363
7.483
2.506
 CD2
CD1
O
 ZN
UNK
O
4i51 1 Q9H9B1 99.65 0.0 X-RAY
 2012-12-19 TYR A:104 A:1053 1.0 0.004 B -90.5 131.8 1.0 0.004 0.0 ZN
HOH
 9.316
2.656
 CD2
O
 ZN
O
TYR C:104 B:1053 2.0 0.009 B -95.7 133.6 2.0 0.009 0.0 ZN
HOH
 9.269
2.656
 CD2
O
 ZN
O
3fpd 1 Q9H9B1 100.0 0.0 X-RAY
 2009-02-17 TYR A:79 A:1053 3.0 0.013 B -98.1 140.9 3.0 0.013 0.0 ZN
HOH
 9.460
6.735
 CD2
O
 ZN
O
TYR B:79 B:1053 3.0 0.013 B -94.6 142.4 3.0 0.013 0.0 ZN
HOH
 9.322
4.033
 CD2
CB
 ZN
O
5tuz 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-22 TYR A:79 A:1084 5.0 0.022 B -96.4 132.1 5.0 0.022 0.0 ZN
HOH
 9.325
2.649
 CD2
O
 ZN
O
TYR B:79 B:1084 2.0 0.009 B -95.4 133.8 2.0 0.009 0.0 ZN
HOH
 9.298
2.652
 CD2
O
 ZN
O
5vsd 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 TYR A:79 A:1084 4.0 0.017 B -99.2 135.2 4.0 0.017 0.0 ZN
HOH
 9.380
2.632
 CD2
O
 ZN
O
TYR B:79 B:1084 2.0 0.009 B -97.9 134.2 2.0 0.009 0.0 ZN
HOH
 9.309
2.719
 CD2
O
 ZN
O
5vsf 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 TYR A:79 A:1084 2.0 0.009 B -100.0 135.7 2.0 0.009 0.0 ZN
HOH
 9.351
2.598
 CD2
O
 ZN
O
TYR B:79 B:1084 3.0 0.013 B -99.4 137.6 3.0 0.013 0.0 ZN
HOH
 9.345
2.791
 CD2
O
 ZN
O
6mbo 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 TYR A:79 A:1053 2.0 0.009 B -93.1 136.3 2.0 0.009 0.0 ZN
HOH
 9.285
2.488
 CD2
O
 ZN
O
TYR B:79 B:1053 0.0 0.0 B -94.3 135.1 0.0 0.0 0.0 JDG
ZN
HOH
 7.299
9.288
2.897
 CB
CD2
O
 C25
ZN
O
6mbp 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 TYR A:79 A:1053 4.0 0.017 B -96.8 133.6 4.0 0.017 0.0 ZN
HOH
 9.357
2.700
 CD2
O
 ZN
O
TYR B:79 B:1053 3.0 0.013 B -96.3 129.7 3.0 0.013 0.0 ZN
EDO
EDO
HOH
 9.286
7.734
5.021
2.657
 CD2
CD2
O
O
 ZN
O1
O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h9b1-f1 1 Q9H9B1 100.0 0.0 TYR A:1084 A:1084 1.0 0.004 B -94.1 133.5