Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 140710483 . T A CCDS7050.2:NM_024757.4:c.3343Tgc>Agc_NP_079033.4:p.1115C>S Homo sapiens euchromatic histone lysine methyltransferase 1 (EHMT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2igq 1 Q9H9B1 100.0 0.0 X-RAY
 2006-10-24 CYS A:134 A:1084 7.0 0.052 -66.8 165.0 7.0 0.052 0.0 ZN
ZN
ZN
HOH
 5.702
2.266
5.659
2.735
 SG
SG
SG
O
 ZN
ZN
ZN
O
CYS B:134 B:1084 7.0 0.052 -69.6 166.0 7.0 0.052 0.0 ZN
ZN
ZN
HOH
 5.800
2.291
5.666
2.667
 SG
SG
SG
O
 ZN
ZN
ZN
O
2rfi 1 Q9H9B1 100.0 0.0 X-RAY
 2007-10-23 CYS A:134 A:1084 7.0 0.052 -65.5 168.3 7.0 0.052 0.0 ZN
ZN
ZN
HOH
 5.827
2.337
5.784
2.540
 SG
SG
SG
O
 ZN
ZN
ZN
O
CYS B:134 B:1084 8.0 0.059 S -67.6 171.5 NA NA NA
3mo0 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 CYS A:134 A:1084 6.0 0.044 -90.8 161.8 6.0 0.044 0.0 ZN
ZN
ZN
HOH
 5.823
2.388
5.742
4.196
 SG
SG
SG
CB
 ZN
ZN
ZN
O
CYS B:134 B:1084 5.0 0.037 S -71.4 163.4 NA NA NA
3mo2 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 CYS A:134 A:1084 7.0 0.052 S -68.7 170.5 7.0 0.052 0.0 ZN
ZN
ZN
HOH
 5.717
2.413
5.690
2.516
 SG
SG
SG
O
 ZN
ZN
ZN
O
CYS B:134 B:1084 10.0 0.074 S -70.3 170.0 NA NA NA
CYS C:134 C:1084 10.0 0.074 S -70.0 173.2 NA NA NA
CYS D:134 D:1084 5.0 0.037 S -56.8 164.2 NA NA NA
3mo5 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 CYS A:134 A:1084 6.0 0.044 -64.5 161.5 6.0 0.044 0.0 ZN
ZN
ZN
HOH
 5.812
2.367
5.702
2.609
 SG
SG
SG
O
 ZN
ZN
ZN
O
CYS B:134 B:1084 8.0 0.059 S -65.6 170.5 NA NA NA
CYS C:134 C:1084 7.0 0.052 S -61.4 166.0 NA NA NA
CYS D:134 D:1084 6.0 0.044 -61.9 167.1 NA NA NA
3sw9 1 Q9H9B1 100.0 0.0 X-RAY
 2011-12-07 CYS A:134 A:1084 5.0 0.037 S -57.2 164.2 5.0 0.037 0.0 ZN
ZN
ZN
 5.593
2.333
5.755
 SG
SG
SG
 ZN
ZN
ZN
CYS C:134 B:1084 6.0 0.044 -59.8 165.5 NA NA NA
3swc 1 Q9H9B1 100.0 0.0 X-RAY
 2011-11-30 CYS A:134 A:1084 6.0 0.044 -54.2 162.7 6.0 0.044 0.0 ZN
ZN
ZN
HOH
 5.689
2.263
5.654
3.803
 SG
SG
SG
N
 ZN
ZN
ZN
O
CYS C:134 B:1084 7.0 0.052 S -66.6 171.9 NA NA NA
3hna 1 Q9H9B1 100.0 0.0 X-RAY
 2009-06-09 CYS A:136 A:1084 6.0 0.044 -65.1 166.3 6.0 0.044 0.0 ZN
ZN
ZN
HOH
 5.822
2.350
5.775
2.639
 SG
SG
SG
O
 ZN
ZN
ZN
O
CYS B:136 B:1084 7.0 0.052 -65.6 169.0 NA NA NA
5ttg 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-01 CYS A:136 A:1115 6.0 0.044 S -67.7 167.2 6.0 0.044 0.0 ZN
ZN
ZN
CL
UNX
HOH
 5.777
2.333
5.758
7.272
7.597
2.724
 SG
SG
SG
O
CB
O
 ZN
ZN
ZN
CL
UNK
O
CYS B:136 B:1115 6.0 0.044 -69.3 168.4 NA NA NA
5v9j 1 Q9H9B1 100.0 0.0 X-RAY
 2018-03-21 CYS A:136 A:1115 7.0 0.052 S -66.6 167.2 7.0 0.052 0.0 ZN
ZN
ZN
CL
UNX
HOH
 5.755
2.292
5.707
7.217
7.598
2.681
 SG
SG
SG
O
CB
O
 ZN
ZN
ZN
CL
UNK
O
CYS B:136 B:1115 7.0 0.052 -67.2 168.8 7.0 0.052 0.0 ZN
ZN
ZN
DMS
UNX
UNX
HOH
 5.750
2.293
5.711
9.837
7.255
8.280
2.467
 SG
SG
SG
CB
N
O
O
 ZN
ZN
ZN
O
UNK
UNK
O
4i51 1 Q9H9B1 99.65 0.0 X-RAY
 2012-12-19 CYS A:135 A:1084 6.0 0.044 -67.5 166.5 6.0 0.044 0.0 ZN
ZN
ZN
UNX
HOH
 5.735
2.261
5.754
7.506
2.659
 SG
SG
SG
N
O
 ZN
ZN
ZN
UNK
O
CYS C:135 B:1084 7.0 0.052 S -66.4 168.1 7.0 0.052 0.0 ZN
ZN
ZN
HOH
 5.785
2.302
5.751
2.640
 SG
SG
SG
O
 ZN
ZN
ZN
O
3fpd 1 Q9H9B1 100.0 0.0 X-RAY
 2009-02-17 CYS A:110 A:1084 6.0 0.044 S -61.5 168.7 6.0 0.044 0.0 ZN
ZN
ZN
HOH
 5.679
2.347
5.617
4.061
 SG
SG
SG
O
 ZN
ZN
ZN
O
CYS B:110 B:1084 8.0 0.059 S -65.6 170.9 8.0 0.059 0.0 ZN
ZN
ZN
HOH
 5.681
2.364
5.766
4.954
 SG
SG
SG
O
 ZN
ZN
ZN
O
5tuz 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-22 CYS A:110 A:1115 6.0 0.044 -67.2 168.2 6.0 0.044 0.0 ZN
ZN
ZN
EDO
HOH
 5.756
2.310
5.727
9.983
3.633
 SG
SG
SG
CB
CA
 ZN
ZN
ZN
O1
O
CYS B:110 B:1115 7.0 0.052 -68.3 168.5 7.0 0.052 0.0 ZN
ZN
ZN
HOH
 5.795
2.317
5.721
2.662
 SG
SG
SG
O
 ZN
ZN
ZN
O
5vsd 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 CYS A:110 A:1115 8.0 0.059 -69.5 168.1 8.0 0.059 0.0 ZN
ZN
ZN
HOH
 5.753
2.317
5.700
2.268
 SG
SG
SG
O
 ZN
ZN
ZN
O
CYS B:110 B:1115 6.0 0.044 S -70.0 169.0 6.0 0.044 0.0 ZN
ZN
ZN
HOH
 5.810
2.375
5.650
3.481
 SG
SG
SG
CA
 ZN
ZN
ZN
O
5vsf 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 CYS A:110 A:1115 6.0 0.044 -68.9 168.8 6.0 0.044 0.0 ZN
ZN
ZN
HOH
 5.792
2.330
5.770
2.395
 SG
SG
SG
O
 ZN
ZN
ZN
O
CYS B:110 B:1115 7.0 0.052 -68.9 168.3 7.0 0.052 0.0 ZN
ZN
ZN
HOH
 5.783
2.315
5.740
2.686
 SG
SG
SG
O
 ZN
ZN
ZN
O
6mbo 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 CYS A:110 A:1084 6.0 0.044 -69.3 169.1 6.0 0.044 0.0 ZN
ZN
ZN
HOH
 2.338
5.804
5.779
2.618
 SG
SG
SG
O
 ZN
ZN
ZN
O
CYS B:110 B:1084 9.0 0.067 -72.5 172.2 9.0 0.067 0.0 EDO
JDG
ZN
ZN
ZN
HOH
 7.672
4.087
5.801
2.325
5.794
2.624
 N
C
SG
SG
SG
O
 O1
C26
ZN
ZN
ZN
O
6mbp 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 CYS A:110 A:1084 6.0 0.044 -69.3 170.2 6.0 0.044 0.0 ZN
ZN
ZN
HOH
 2.306
5.787
5.710
2.543
 SG
SG
SG
O
 ZN
ZN
ZN
O
CYS B:110 B:1084 7.0 0.052 -68.5 168.9 7.0 0.052 0.0 EDO
EDO
ZN
ZN
ZN
EDO
EDO
HOH
 9.578
9.090
5.765
2.325
5.787
6.475
9.071
2.553
 N
CB
SG
SG
SG
O
SG
O
 C1
O2
ZN
ZN
ZN
O1
C2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h9b1-f1 1 Q9H9B1 100.0 0.0 CYS A:1115 A:1115 3.0 0.022 -61.3 148.6