Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 140710486 . C A CCDS7050.2:NM_024757.4:c.3346Cga>Aga_NP_079033.4:p.1116R>R Homo sapiens euchromatic histone lysine methyltransferase 1 (EHMT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2igq 1 Q9H9B1 100.0 0.0 X-RAY
 2006-10-24 ARG A:135 A:1085 79.0 0.351 S -55.3 -38.2 79.0 0.351 0.0 ZN
ZN
ZN
HOH
 8.778
5.365
7.594
2.454
 N
N
N
O
 ZN
ZN
ZN
O
ARG B:135 B:1085 78.0 0.347 S -63.2 -33.0 78.0 0.347 0.0 ZN
ZN
ZN
HOH
 8.823
5.370
7.614
2.520
 N
N
N
O
 ZN
ZN
ZN
O
2rfi 1 Q9H9B1 100.0 0.0 X-RAY
 2007-10-23 ARG A:135 A:1085 73.0 0.324 S -63.6 -32.8 73.0 0.324 0.0 ZN
ZN
ZN
HOH
 8.733
5.257
7.536
2.777
 N
N
N
NE
 ZN
ZN
ZN
O
ARG B:135 B:1085 74.0 0.329 T -62.7 -30.2 NA NA NA
3mo0 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 ARG A:135 A:1085 82.0 0.364 S -44.8 -50.3 82.0 0.364 0.0 ZN
ZN
ZN
HOH
 8.937
5.548
7.760
6.735
 C
N
N
N
 ZN
ZN
ZN
O
ARG B:135 B:1085 183.0 0.813 T -77.1 12.5 NA NA NA
3mo2 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 ARG A:135 A:1085 82.0 0.364 S -69.9 -25.3 82.0 0.364 0.0 ZN
ZN
ZN
HOH
 8.720
5.478
7.595
3.218
 C
N
N
O
 ZN
ZN
ZN
O
ARG B:135 B:1085 78.0 0.347 T -61.2 -39.2 NA NA NA
ARG C:135 C:1085 77.0 0.342 S -67.4 -36.1 NA NA NA
ARG D:135 D:1085 77.0 0.342 S -68.2 -25.8 NA NA NA
3mo5 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 ARG A:135 A:1085 80.0 0.356 T -61.0 -30.7 80.0 0.356 0.0 ZN
ZN
ZN
HOH
 8.783
5.351
7.558
2.805
 C
N
N
O
 ZN
ZN
ZN
O
ARG B:135 B:1085 77.0 0.342 S -63.9 -33.4 NA NA NA
ARG C:135 C:1085 77.0 0.342 S -62.5 -27.8 NA NA NA
ARG D:135 D:1085 85.0 0.378 S -69.1 -32.3 NA NA NA
3sw9 1 Q9H9B1 100.0 0.0 X-RAY
 2011-12-07 ARG A:135 A:1085 78.0 0.347 S -66.2 -20.8 78.0 0.347 0.0 ZN
ZN
ZN
HOH
 8.473
5.166
7.539
9.179
 N
N
N
O
 ZN
ZN
ZN
O
ARG C:135 B:1085 80.0 0.356 T -60.1 -42.8 NA NA NA
3swc 1 Q9H9B1 100.0 0.0 X-RAY
 2011-11-30 ARG A:135 A:1085 59.0 0.262 S -69.1 -30.5 59.0 0.262 0.0 ZN
ZN
ZN
HOH
 8.479
5.048
7.361
5.402
 N
N
N
N
 ZN
ZN
ZN
O
ARG C:135 B:1085 73.0 0.324 S -72.8 -24.5 NA NA NA
3hna 1 Q9H9B1 100.0 0.0 X-RAY
 2009-06-09 ARG A:137 A:1085 56.0 0.249 S -65.3 -25.9 56.0 0.249 0.0 ZN
ZN
ZN
HOH
 8.799
5.348
7.621
2.727
 N
N
N
O
 ZN
ZN
ZN
O
ARG B:137 B:1085 69.0 0.307 T -61.0 -33.0 NA NA NA
5ttg 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-01 ARG A:137 A:1116 77.0 0.342 S -63.1 -29.3 77.0 0.342 0.0 ZN
ZN
ZN
CL
UNX
HOH
 8.778
5.334
7.582
7.085
9.292
2.697
 N
N
N
O
N
O
 ZN
ZN
ZN
CL
UNK
O
ARG B:137 B:1116 76.0 0.338 S -63.6 -31.4 NA NA NA
5v9j 1 Q9H9B1 100.0 0.0 X-RAY
 2018-03-21 ARG A:137 A:1116 79.0 0.351 S -64.0 -29.6 79.0 0.351 0.0 HOH
 3.494
 NH1
 O
ARG B:137 B:1116 88.0 0.391 S -68.3 -26.4 88.0 0.391 0.0 ZN
ZN
ZN
UNX
UNX
HOH
 8.742
5.288
7.549
9.557
7.404
2.709
 N
N
N
N
O
O
 ZN
ZN
ZN
UNK
UNK
O
4i51 1 Q9H9B1 99.65 0.0 X-RAY
 2012-12-19 ARG A:136 A:1085 81.0 0.36 S -56.4 -34.1 81.0 0.36 0.0 UNX
HOH
 9.797
2.624
 N
O
 UNK
O
ARG C:136 B:1085 75.0 0.333 S -60.9 -29.6 75.0 0.333 0.0 ZN
ZN
ZN
HOH
 8.764
5.276
7.590
2.841
 N
N
N
O
 ZN
ZN
ZN
O
3fpd 1 Q9H9B1 100.0 0.0 X-RAY
 2009-02-17 ARG A:111 A:1085 78.0 0.347 S -65.4 -35.0 78.0 0.347 0.0 ZN
ZN
ZN
HOH
 8.542
5.180
7.442
5.747
 N
N
N
CB
 ZN
ZN
ZN
O
ARG B:111 B:1085 72.0 0.32 S -64.0 -35.2 72.0 0.32 0.0 ZN
ZN
ZN
HOH
 8.627
5.366
7.641
2.905
 C
N
N
O
 ZN
ZN
ZN
O
5tuz 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-22 ARG A:111 A:1116 83.0 0.369 S -67.4 -27.2 83.0 0.369 0.0 ZN
ZN
ZN
HOH
 8.724
5.271
7.526
2.690
 N
N
N
O
 ZN
ZN
ZN
O
ARG B:111 B:1116 66.0 0.293 T -61.7 -31.2 66.0 0.293 0.0 ZN
ZN
ZN
HOH
 8.788
5.307
7.595
2.588
 N
N
N
O
 ZN
ZN
ZN
O
5vsd 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 ARG A:111 A:1116 74.0 0.329 S -65.0 -33.4 74.0 0.329 0.0 ZN
ZN
ZN
HOH
 8.714
5.274
7.488
2.422
 N
N
N
NE
 ZN
ZN
ZN
O
ARG B:111 B:1116 79.0 0.351 S -62.8 -33.5 79.0 0.351 0.0 ZN
ZN
ZN
HOH
 8.730
5.306
7.492
2.763
 N
N
N
O
 ZN
ZN
ZN
O
5vsf 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 ARG A:111 A:1116 77.0 0.342 S -63.0 -32.6 77.0 0.342 0.0 ZN
ZN
ZN
HOH
 8.762
5.290
7.562
2.780
 N
N
N
O
 ZN
ZN
ZN
O
ARG B:111 B:1116 74.0 0.329 T -61.5 -33.1 74.0 0.329 0.0 ZN
ZN
ZN
HOH
 8.757
5.296
7.560
3.728
 N
N
N
NH2
 ZN
ZN
ZN
O
6mbo 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 ARG A:111 A:1085 80.0 0.356 T -68.7 -35.8 80.0 0.356 0.0 ZN
ZN
ZN
HOH
 5.247
8.700
7.530
2.774
 N
N
N
O
 ZN
ZN
ZN
O
ARG B:111 B:1085 72.0 0.32 T -64.3 -33.8 72.0 0.32 0.0 JDG
ZN
ZN
ZN
HOH
 3.973
7.549
5.243
8.707
2.716
 N
N
N
N
O
 C26
ZN
ZN
ZN
O
6mbp 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 ARG A:111 A:1085 81.0 0.36 S -67.0 -30.1 81.0 0.36 0.0 ZN
ZN
ZN
HOH
 5.268
8.707
7.517
2.543
 N
N
N
NE
 ZN
ZN
ZN
O
ARG B:111 B:1085 82.0 0.364 S -64.7 -28.9 82.0 0.364 0.0 ZN
ZN
ZN
EDO
EDO
HOH
 7.567
5.276
8.735
6.637
2.910
2.655
 N
N
N
O
NH1
O
 ZN
ZN
ZN
O1
O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h9b1-f1 1 Q9H9B1 100.0 0.0 ARG A:1116 A:1116 80.0 0.356 S -51.8 -39.1