Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 140728849 . C A CCDS7050.2:NM_024757.4:c.3589Cgg>Agg_NP_079033.4:p.1197R>R Homo sapiens euchromatic histone lysine methyltransferase 1 (EHMT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2igq 1 Q9H9B1 100.0 0.0 X-RAY
 2006-10-24 ARG A:216 A:1166 4.0 0.018 G -55.9 -19.2 4.0 0.018 0.0 SAH
HOH
 3.570
2.954
 O
NH1
 SD
O
ARG B:216 B:1166 4.0 0.018 G -62.5 -17.9 4.0 0.018 0.0 SAH
HOH
 3.579
2.885
 O
NH1
 CB
O
2rfi 1 Q9H9B1 100.0 0.0 X-RAY
 2007-10-23 ARG A:216 A:1166 3.0 0.013 G -62.6 -20.6 1.0 0.004 0.009 SAH
HOH
 3.545
2.886
 O
NH1
 CG
O
ARG B:216 B:1166 12.0 0.053 G -67.0 -10.7 NA NA NA
3mo0 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 ARG A:216 A:1166 5.0 0.022 G -71.2 -8.6 5.0 0.022 0.0 SAH
HOH
 3.417
7.983
 O
C
 CG
O
ARG B:216 B:1166 7.0 0.031 G -70.9 -7.1 NA NA NA
3mo2 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 ARG A:216 A:1166 11.0 0.049 G -57.8 -23.9 11.0 0.049 0.0 E67
HOH
 5.886
3.313
 O
O
 NBG
O
ARG B:216 B:1166 10.0 0.044 G -63.3 -14.5 NA NA NA
ARG C:216 C:1166 4.0 0.018 G -64.9 -13.5 NA NA NA
ARG D:216 D:1166 4.0 0.018 G -62.1 -14.5 NA NA NA
3mo5 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 ARG A:216 A:1166 11.0 0.049 G -66.1 -10.6 11.0 0.049 0.0 E72
HOH
 5.881
2.867
 O
NH1
 NBG
O
ARG B:216 B:1166 10.0 0.044 G -63.0 -16.1 NA NA NA
ARG C:216 C:1166 4.0 0.018 G -61.3 -17.3 NA NA NA
ARG D:216 D:1166 4.0 0.018 G -65.3 -12.0 NA NA NA
3sw9 1 Q9H9B1 100.0 0.0 X-RAY
 2011-12-07 ARG A:216 A:1166 0.0 0.0 G -61.8 -26.3 0.0 0.0 0.0 SFG
 2.605
 O
 NE
ARG C:216 B:1166 1.0 0.004 G -57.4 -20.4 NA NA NA
3swc 1 Q9H9B1 100.0 0.0 X-RAY
 2011-11-30 ARG A:216 A:1166 2.0 0.009 G -56.3 -23.5 0.0 0.0 0.009 SAH
HOH
 3.485
3.577
 O
O
 CG
O
ARG C:216 B:1166 4.0 0.018 G -62.7 -22.8 NA NA NA
3hna 1 Q9H9B1 100.0 0.0 X-RAY
 2009-06-09 ARG A:218 A:1166 13.0 0.058 G -62.9 -20.2 10.0 0.044 0.014 C:None:0.004
 SAH
HOH
 3.602
2.856
 O
NH1
 CG
O
ARG B:218 B:1166 3.0 0.013 G -63.7 -20.7 NA NA NA
5ttg 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-01 ARG A:218 A:1197 2.0 0.009 G -62.5 -18.0 2.0 0.009 0.0 SAM
HOH
 3.224
2.808
 O
NH1
 CE
O
ARG B:218 B:1197 2.0 0.009 G -60.0 -19.7 NA NA NA
5v9j 1 Q9H9B1 100.0 0.0 X-RAY
 2018-03-21 ARG A:218 A:1197 10.0 0.044 G -60.3 -19.7 10.0 0.044 0.0 SAM
UNX
UNX
HOH
 3.152
7.346
9.806
2.716
 O
NH1
O
NH1
 CE
UNK
UNK
O
ARG B:218 B:1197 2.0 0.009 G -57.3 -22.3 2.0 0.009 0.0 SAM
UNX
HOH
 3.194
8.245
2.841
 O
NH2
NH1
 CE
UNK
O
4i51 1 Q9H9B1 99.65 0.0 X-RAY
 2012-12-19 ARG A:217 A:1166 3.0 0.013 G -59.9 -21.6 2.0 0.009 0.004 SAH
HOH
 3.382
2.939
 O
NH2
 CG
O
ARG C:217 B:1166 9.0 0.04 G -62.4 -17.5 7.0 0.031 0.009 SAH
HOH
 3.568
2.758
 O
NH2
 CG
O
3fpd 1 Q9H9B1 100.0 0.0 X-RAY
 2009-02-17 ARG A:192 A:1166 3.0 0.013 G -62.5 -13.6 3.0 0.013 0.0 SAH
HOH
 3.295
3.452
 O
NH1
 CG
O
ARG B:192 B:1166 3.0 0.013 G -71.5 -20.6 3.0 0.013 0.0 SAH
HOH
 3.283
5.738
 O
O
 CG
O
5tuz 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-22 ARG A:192 A:1197 3.0 0.013 G -61.3 -17.8 3.0 0.013 0.0 SAM
HOH
 3.116
2.822
 O
NH1
 CE
O
ARG B:192 B:1197 2.0 0.009 G -59.4 -17.4 2.0 0.009 0.0 SAM
HOH
 3.123
2.707
 O
NH1
 CE
O
5vsd 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 ARG A:192 A:1197 2.0 0.009 G -63.7 -15.2 2.0 0.009 0.0 SAM
HOH
 3.181
2.786
 O
NH1
 CE
O
ARG B:192 B:1197 2.0 0.009 G -65.2 -16.1 2.0 0.009 0.0 SAM
HOH
 3.193
2.664
 O
NH1
 CE
O
5vsf 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 ARG A:192 A:1197 2.0 0.009 G -63.0 -16.0 2.0 0.009 0.0 SAM
HOH
 3.132
2.811
 O
NH1
 CE
O
ARG B:192 B:1197 2.0 0.009 G -63.3 -15.8 2.0 0.009 0.0 SAM
HOH
 3.119
2.728
 O
NH1
 CE
O
6mbo 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 ARG A:192 A:1166 3.0 0.013 G -65.8 -11.5 3.0 0.013 0.0 JDG
SAH
EDO
HOH
 5.963
3.584
7.694
2.828
 O
O
CD
NH1
 C11
CG
C1
O
ARG B:192 B:1166 4.0 0.018 G -66.0 -11.4 4.0 0.018 0.0 JDG
JDG
SAH
EDO
HOH
 9.777
6.053
3.518
7.509
2.867
 NH2
O
O
NH1
NH1
 C11
C11
CG
C2
O
6mbp 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 ARG A:192 A:1166 4.0 0.018 G -63.8 -11.3 4.0 0.018 0.0 JDG
SAH
HOH
 5.894
3.564
2.919
 O
O
NH2
 C11
CG
O
ARG B:192 B:1166 3.0 0.013 G -66.9 -9.4 3.0 0.013 0.0 JDG
SAH
HOH
 6.052
3.646
2.837
 O
O
NH1
 C11
CG
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h9b1-f1 1 Q9H9B1 100.0 0.0 ARG A:1197 A:1197 9.0 0.04 G -59.3 -9.9