Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 140728904 . C A CCDS7050.2:NM_024757.4:c.3644gCc>gAc_NP_079033.4:p.1215A>D Homo sapiens euchromatic histone lysine methyltransferase 1 (EHMT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2igq 1 Q9H9B1 100.0 0.0 X-RAY
 2006-10-24 ALA A:234 A:1184 47.0 0.409 S -77.0 -19.9 47.0 0.409 0.0 HOH
 2.652
 O
 O
ALA B:234 B:1184 50.0 0.435 S -72.9 -19.1 50.0 0.435 0.0 HOH
 2.693
 O
 O
2rfi 1 Q9H9B1 100.0 0.0 X-RAY
 2007-10-23 ALA A:234 A:1184 46.0 0.4 S -72.7 -22.6 46.0 0.4 0.0 HOH
 2.657
 O
 O
ALA B:234 B:1184 47.0 0.409 S -75.9 -21.6 NA NA NA
3mo0 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 ALA A:234 A:1184 33.0 0.287 S -161.3 142.9 33.0 0.287 0.0 ZN
ZN
HOH
 9.681
6.042
4.277
 CB
CB
CB
 ZN
ZN
O
ALA B:234 B:1184 33.0 0.287 S -67.6 -115.5 NA NA NA
3mo2 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 ALA A:234 A:1184 52.0 0.452 S -63.0 -25.6 52.0 0.452 0.0 HOH
 2.799
 O
 O
ALA B:234 B:1184 47.0 0.409 S -67.3 -18.8 NA NA NA
ALA C:234 C:1184 46.0 0.4 S -63.5 -21.0 NA NA NA
ALA D:234 D:1184 48.0 0.417 S -68.9 -29.0 NA NA NA
3mo5 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 ALA A:234 A:1184 45.0 0.391 S -63.6 -27.9 45.0 0.391 0.0 HOH
 2.519
 O
 O
ALA B:234 B:1184 47.0 0.409 S -64.3 -24.7 NA NA NA
ALA C:234 C:1184 46.0 0.4 S -63.3 -29.2 NA NA NA
ALA D:234 D:1184 48.0 0.417 S -57.3 -24.6 NA NA NA
3sw9 1 Q9H9B1 100.0 0.0 X-RAY
 2011-12-07 ALA A:234 A:1184 43.0 0.374 S -67.3 -17.1 43.0 0.374 0.0 HOH
 4.075
 CB
 O
ALA C:234 B:1184 44.0 0.383 S -57.0 -28.8 NA NA NA
3swc 1 Q9H9B1 100.0 0.0 X-RAY
 2011-11-30 ALA A:234 A:1184 48.0 0.417 S -77.4 -20.5 48.0 0.417 0.0 HOH
 2.760
 O
 O
ALA C:234 B:1184 48.0 0.417 S -71.1 -14.3 NA NA NA
3hna 1 Q9H9B1 100.0 0.0 X-RAY
 2009-06-09 ALA A:236 A:1184 44.0 0.383 S -73.4 -21.8 44.0 0.383 0.0 HOH
 2.632
 O
 O
ALA B:236 B:1184 43.0 0.374 S -71.7 -21.7 NA NA NA
5ttg 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-01 ALA A:236 A:1215 47.0 0.409 S -75.5 -20.8 47.0 0.409 0.0 GOL
UNX
HOH
 7.792
4.897
2.658
 N
CB
O
 O2
UNK
O
ALA B:236 B:1215 47.0 0.409 S -75.9 -20.6 NA NA NA
5v9j 1 Q9H9B1 100.0 0.0 X-RAY
 2018-03-21 ALA A:236 A:1215 48.0 0.417 S -76.2 -21.9 48.0 0.417 0.0 CL
UNX
UNX
HOH
 4.268
9.892
9.097
2.695
 CB
CB
O
O
 CL
UNK
UNK
O
ALA B:236 B:1215 48.0 0.417 S -73.0 -24.2 48.0 0.417 0.0 UNX
CL
UNX
HOH
 9.868
4.242
9.982
2.629
 O
CB
CB
O
 UNK
CL
UNK
O
4i51 1 Q9H9B1 99.65 0.0 X-RAY
 2012-12-19 ALA A:235 A:1184 45.0 0.391 S -69.7 -25.0 45.0 0.391 0.0 GOL
GOL
HOH
 9.056
6.682
2.559
 CB
O
O
 O1
O1
O
ALA C:235 B:1184 47.0 0.409 S -77.6 -23.1 44.0 0.383 0.026 A:Q9H9B1:0.026
 GOL
GOL
UNX
HOH
 6.660
8.812
4.617
2.640
 O
CB
CB
O
 O3
C3
UNK
O
3fpd 1 Q9H9B1 100.0 0.0 X-RAY
 2009-02-17 ALA A:210 A:1184 45.0 0.391 S -60.4 -18.7 45.0 0.391 0.0 HOH
 2.820
 O
 O
ALA B:210 B:1184 47.0 0.409 S -64.5 -35.2 47.0 0.409 0.0 HOH
 2.533
 O
 O
5tuz 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-22 ALA A:210 A:1215 49.0 0.426 S -75.5 -21.1 49.0 0.426 0.0 EDO
HOH
 7.397
2.730
 O
O
 O1
O
ALA B:210 B:1215 46.0 0.4 S -71.7 -21.3 46.0 0.4 0.0 EDO
HOH
 8.830
2.642
 CB
O
 O2
O
5vsd 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 ALA A:210 A:1215 49.0 0.426 S -71.0 -22.9 49.0 0.426 0.0 GOL
HOH
 6.411
2.636
 O
O
 O1
O
ALA B:210 B:1215 48.0 0.417 S -68.4 -23.2 48.0 0.417 0.0 GOL
GOL
HOH
 8.732
7.615
2.743
 CB
N
O
 C3
O2
O
5vsf 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 ALA A:210 A:1215 48.0 0.417 S -73.8 -20.9 48.0 0.417 0.0 GOL
GOL
HOH
 8.521
8.347
2.667
 CB
O
O
 O1
O2
O
ALA B:210 B:1215 44.0 0.383 S -74.9 -21.4 44.0 0.383 0.0 GOL
GOL
HOH
 7.497
8.929
2.741
 CB
CB
O
 O1
O1
O
6mbo 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 ALA A:210 A:1184 46.0 0.4 S -69.9 -22.6 44.0 0.383 0.017 B:Q9H9B1:0.017
 EDO
EDO
HOH
 7.117
6.923
2.764
 CB
O
O
 C2
O1
O
ALA B:210 B:1184 47.0 0.409 S -70.9 -25.3 45.0 0.391 0.018 A:Q9H9B1:0.017
 EDO
EDO
HOH
 9.162
7.667
2.837
 CB
CB
O
 O2
C2
O
6mbp 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 ALA A:210 A:1184 47.0 0.409 S -87.1 -20.7 47.0 0.409 0.0 EDO
HOH
 7.246
2.689
 CB
O
 C1
O
ALA B:210 B:1184 45.0 0.391 S -89.4 -20.6 45.0 0.391 0.0 EDO
HOH
 3.872
2.714
 CA
O
 O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h9b1-f1 1 Q9H9B1 100.0 0.0 ALA A:1215 A:1215 60.0 0.522 S -80.8 -16.8