Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 140728909 . C A CCDS7050.2:NM_024757.4:c.3649Cag>Aag_NP_079033.4:p.1217Q>K Homo sapiens euchromatic histone lysine methyltransferase 1 (EHMT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2igq 1 Q9H9B1 100.0 0.0 X-RAY
 2006-10-24 GLN A:236 A:1186 38.0 0.211 -133.2 40.9 38.0 0.211 0.0 ZN
HOH
 7.519
2.738
 NE2
OE1
 ZN
O
GLN B:236 B:1186 29.0 0.161 -126.0 39.6 29.0 0.161 0.0 ZN
HOH
 7.340
2.651
 NE2
OE1
 ZN
O
2rfi 1 Q9H9B1 100.0 0.0 X-RAY
 2007-10-23 GLN A:236 A:1186 31.0 0.172 -130.5 34.9 31.0 0.172 0.0 ZN
HOH
 7.392
2.705
 NE2
OE1
 ZN
O
GLN B:236 B:1186 38.0 0.211 -126.7 39.8 NA NA NA
3mo0 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 GLN A:236 A:1186 48.0 0.267 -143.1 136.8 48.0 0.267 0.0 ZN
HOH
 9.004
3.245
 N
O
 ZN
O
GLN B:236 B:1186 37.0 0.206 -58.9 121.8 NA NA NA
3mo2 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 GLN A:236 A:1186 29.0 0.161 -126.4 35.8 29.0 0.161 0.0 ZN
HOH
 7.623
2.816
 NE2
N
 ZN
O
GLN B:236 B:1186 32.0 0.178 -126.1 41.9 NA NA NA
GLN C:236 C:1186 35.0 0.194 -131.1 41.6 NA NA NA
GLN D:236 D:1186 31.0 0.172 -126.0 38.3 NA NA NA
3mo5 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 GLN A:236 A:1186 29.0 0.161 -127.0 39.1 29.0 0.161 0.0 ZN
HOH
 7.396
2.661
 NE2
O
 ZN
O
GLN B:236 B:1186 33.0 0.183 -127.1 38.2 NA NA NA
GLN C:236 C:1186 32.0 0.178 -124.7 36.5 NA NA NA
GLN D:236 D:1186 29.0 0.161 -127.8 37.2 NA NA NA
3sw9 1 Q9H9B1 100.0 0.0 X-RAY
 2011-12-07 GLN A:236 A:1186 35.0 0.194 -123.0 48.8 35.0 0.194 0.0 ZN
HOH
 7.558
3.352
 NE2
NE2
 ZN
O
GLN C:236 B:1186 42.0 0.233 -127.0 41.4 NA NA NA
3swc 1 Q9H9B1 100.0 0.0 X-RAY
 2011-11-30 GLN A:236 A:1186 32.0 0.178 -126.8 33.3 32.0 0.178 0.0 ZN
HOH
 7.374
2.826
 NE2
OE1
 ZN
O
GLN C:236 B:1186 36.0 0.2 -123.6 40.4 NA NA NA
3hna 1 Q9H9B1 100.0 0.0 X-RAY
 2009-06-09 GLN A:238 A:1186 36.0 0.2 -127.7 37.0 36.0 0.2 0.0 ZN
HOH
 7.509
2.704
 NE2
O
 ZN
O
GLN B:238 B:1186 31.0 0.172 -128.3 36.6 NA NA NA
5ttg 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-01 GLN A:238 A:1217 37.0 0.206 -126.4 35.9 37.0 0.206 0.0 ZN
GOL
UNX
HOH
 7.486
7.854
8.495
2.611
 NE2
N
N
O
 ZN
O2
UNK
O
GLN B:238 B:1217 29.0 0.161 -128.2 35.2 NA NA NA
5v9j 1 Q9H9B1 100.0 0.0 X-RAY
 2018-03-21 GLN A:238 A:1217 36.0 0.2 -125.9 32.7 36.0 0.2 0.0 ZN
CL
UNX
HOH
 7.485
8.189
7.133
2.711
 NE2
N
OE1
O
 ZN
CL
UNK
O
GLN B:238 B:1217 27.0 0.15 -127.9 35.1 27.0 0.15 0.0 ZN
CL
HOH
 7.495
8.100
2.625
 NE2
N
OE1
 ZN
CL
O
4i51 1 Q9H9B1 99.65 0.0 X-RAY
 2012-12-19 GLN A:237 A:1186 30.0 0.167 -125.6 39.0 30.0 0.167 0.0 ZN
UNX
HOH
 7.300
6.536
2.511
 NE2
O
O
 ZN
UNK
O
GLN C:237 B:1186 34.0 0.189 -123.9 36.8 34.0 0.189 0.0 ZN
UNX
HOH
 7.450
8.222
2.700
 NE2
N
O
 ZN
UNK
O
3fpd 1 Q9H9B1 100.0 0.0 X-RAY
 2009-02-17 GLN A:212 A:1186 39.0 0.217 -129.5 43.0 39.0 0.217 0.0 ZN
HOH
 7.557
2.859
 NE2
N
 ZN
O
GLN B:212 B:1186 28.0 0.156 -126.2 46.1 28.0 0.156 0.0 ZN
HOH
 7.661
3.081
 NE2
N
 ZN
O
5tuz 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-22 GLN A:212 A:1217 27.0 0.15 -129.1 40.2 27.0 0.15 0.0 ZN
HOH
 7.454
2.480
 NE2
OE1
 ZN
O
GLN B:212 B:1217 37.0 0.206 -125.5 39.5 37.0 0.206 0.0 ZN
HOH
 7.484
2.624
 NE2
O
 ZN
O
5vsd 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 GLN A:212 A:1217 28.0 0.156 -130.6 39.4 28.0 0.156 0.0 ZN
GOL
HOH
 7.513
9.972
2.701
 NE2
N
OE1
 ZN
O1
O
GLN B:212 B:1217 41.0 0.228 -128.5 40.4 41.0 0.228 0.0 ZN
GOL
HOH
 7.489
7.644
2.650
 OE1
N
O
 ZN
O2
O
5vsf 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 GLN A:212 A:1217 28.0 0.156 -129.5 38.6 28.0 0.156 0.0 ZN
HOH
 7.438
2.549
 NE2
OE1
 ZN
O
GLN B:212 B:1217 36.0 0.2 -127.5 38.1 36.0 0.2 0.0 ZN
HOH
 7.434
2.669
 NE2
O
 ZN
O
6mbo 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 GLN A:212 A:1186 29.0 0.161 -127.7 33.3 29.0 0.161 0.0 JDG
ZN
EDO
HOH
 9.644
7.480
8.051
2.564
 OE1
NE2
N
OE1
 C29
ZN
O1
O
GLN B:212 B:1186 35.0 0.194 -128.4 37.0 35.0 0.194 0.0 ZN
EDO
HOH
 7.473
8.253
2.689
 NE2
N
O
 ZN
O2
O
6mbp 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 GLN A:212 A:1186 30.0 0.167 -126.2 32.4 30.0 0.167 0.0 ZN
EDO
HOH
 7.528
8.007
2.589
 NE2
N
O
 ZN
O2
O
GLN B:212 B:1186 32.0 0.178 -123.9 37.2 32.0 0.178 0.0 ZN
EDO
HOH
 7.537
8.828
2.649
 NE2
NE2
OE1
 ZN
O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h9b1-f1 1 Q9H9B1 100.0 0.0 GLN A:1217 A:1217 25.0 0.139 -124.8 20.0