Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 140729240 . G A CCDS7050.2:NM_024757.4:c.3732gaG>gaA_NP_079033.4:p.1244E>E Homo sapiens euchromatic histone lysine methyltransferase 1 (EHMT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2igq 1 Q9H9B1 100.0 0.0 X-RAY
 2006-10-24 GLU A:263 A:1213 126.0 0.663 H -67.7 -36.5 126.0 0.663 0.0 HOH
 2.520
 OE1
 O
GLU B:263 B:1213 117.0 0.616 H -76.7 -40.2 117.0 0.616 0.0 HOH
 2.701
 OE2
 O
2rfi 1 Q9H9B1 100.0 0.0 X-RAY
 2007-10-23 GLU A:263 A:1213 87.0 0.458 H -70.0 -30.0 84.0 0.442 0.016 C:None:0.016
 HOH
 2.579
 OE2
 O
GLU B:263 B:1213 107.0 0.563 H -67.1 -35.1 NA NA NA
3mo0 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 GLU A:263 A:1213 144.0 0.758 H -50.4 -51.5 144.0 0.758 0.0 E11
E11
HOH
 6.459
6.306
6.811
 C
C
N
 CBI
CBI
O
GLU B:263 B:1213 108.0 0.568 H -78.2 -51.5 NA NA NA
3mo2 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 GLU A:263 A:1213 68.0 NA H -60.0 -55.0 68.0 NA NA E67
HOH
 6.486
6.647
 N
N
 CBC
O
GLU B:263 B:1213 68.0 NA H -63.1 -51.6 NA NA NA
GLU C:263 C:1213 98.0 0.516 H -65.2 -47.0 NA NA NA
GLU D:263 D:1213 80.0 NA H -54.1 -58.4 NA NA NA
3mo5 1 Q9H9B1 100.0 0.0 X-RAY
 2010-06-30 GLU A:263 A:1213 105.0 0.553 H -64.1 -44.0 105.0 0.553 0.0 E72
HOH
 6.550
3.499
 C
N
 OAK
O
GLU B:263 B:1213 66.0 NA H -60.6 -47.8 NA NA NA
GLU C:263 C:1213 150.0 0.789 H -68.2 -37.2 NA NA NA
GLU D:263 D:1213 80.0 NA H -64.1 -45.4 NA NA NA
3sw9 1 Q9H9B1 100.0 0.0 X-RAY
 2011-12-07 GLU A:263 A:1213 108.0 0.568 H -78.2 -45.8 108.0 0.568 0.0
GLU C:263 B:1213 102.0 0.537 H -67.1 -47.3 NA NA NA
3swc 1 Q9H9B1 100.0 0.0 X-RAY
 2011-11-30 GLU A:263 A:1213 96.0 0.505 H -76.0 -35.4 92.0 0.484 0.021 B:O88508:0.021
 HOH
 3.703
 N
 O
GLU C:263 B:1213 101.0 0.532 H -63.2 -42.4 NA NA NA
3hna 1 Q9H9B1 100.0 0.0 X-RAY
 2009-06-09 GLU A:265 A:1213 93.0 0.489 H -69.5 -30.8 91.0 0.479 0.01 C:None:0.011
 ZN
HOH
 9.871
2.595
 OE2
OE2
 ZN
O
GLU B:265 B:1213 67.0 0.353 H -71.3 -29.6 NA NA NA
5ttg 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-01 GLU A:265 A:1244 104.0 0.547 H -74.1 -31.4 104.0 0.547 0.0 7KZ
UNX
HOH
 6.892
7.165
2.662
 N
N
OE2
 C19
UNK
O
GLU B:265 B:1244 120.0 0.632 H -76.2 -30.6 NA NA NA
5v9j 1 Q9H9B1 100.0 0.0 X-RAY
 2018-03-21 GLU A:265 A:1244 100.0 0.526 H -76.8 -33.7 100.0 0.526 0.0 90P
HOH
 6.855
2.619
 N
OE2
 C
O
GLU B:265 B:1244 125.0 0.658 H -74.4 -31.8 125.0 0.658 0.0 HOH
 2.512
 OE1
 O
4i51 1 Q9H9B1 99.65 0.0 X-RAY
 2012-12-19 GLU A:264 A:1213 106.0 0.558 H -73.6 -34.5 102.0 0.537 0.021 B:None:0.021
 HOH
 3.122
 N
 O
GLU C:264 B:1213 103.0 0.542 H -69.0 -44.2 101.0 0.532 0.01 D:None:0.011
 HOH
 2.804
 N
 O
3fpd 1 Q9H9B1 100.0 0.0 X-RAY
 2009-02-17 GLU A:239 A:1213 122.0 0.642 H -66.4 -39.3 122.0 0.642 0.0 Q4A
HOH
 6.554
3.465
 C
N
 CBI
O
GLU B:239 B:1213 118.0 0.621 H -73.7 -39.7 118.0 0.621 0.0 Q4A
HOH
 6.479
2.805
 C
OE1
 CBI
O
5tuz 1 Q9H9B1 100.0 0.0 X-RAY
 2017-02-22 GLU A:239 A:1244 113.0 0.595 H -73.4 -28.7 113.0 0.595 0.0 7L6
HOH
 6.917
2.589
 N
OE2
 CAB
O
GLU B:239 B:1244 106.0 0.558 H -74.6 -30.6 106.0 0.558 0.0 7L6
HOH
 6.914
2.997
 N
OE2
 CAB
O
5vsd 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 GLU A:239 A:1244 118.0 0.621 H -74.4 -31.7 118.0 0.621 0.0 ZN
9HJ
HOH
 9.836
6.946
2.353
 OE1
C
OE2
 ZN
OAT
O
GLU B:239 B:1244 101.0 0.532 H -76.0 -31.4 101.0 0.532 0.0 9HJ
HOH
 6.851
2.645
 N
OE1
 CAB
O
5vsf 1 Q9H9B1 100.0 0.0 X-RAY
 2017-07-12 GLU A:239 A:1244 119.0 0.626 H -78.3 -26.7 119.0 0.626 0.0 9HG
HOH
 6.926
2.987
 N
O
 CAB
O
GLU B:239 B:1244 105.0 0.553 H -79.1 -27.4 105.0 0.553 0.0 9HG
HOH
 6.979
2.526
 N
OE1
 CAB
O
6mbo 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 GLU A:239 A:1213 103.0 0.542 H -75.7 -34.7 103.0 0.542 0.0 JDG
HOH
 7.028
2.330
 N
OE1
 C07
O
GLU B:239 B:1213 99.0 0.521 H -82.1 -28.3 99.0 0.521 0.0 JDG
EDO
HOH
 7.006
6.123
2.597
 N
N
OE1
 C07
O1
O
6mbp 1 Q9H9B1 100.0 0.0 X-RAY
 2019-02-27 GLU A:239 A:1213 97.0 0.511 H -77.5 -34.9 97.0 0.511 0.0 JDG
HOH
 7.000
2.759
 N
OE1
 C07
O
GLU B:239 B:1213 98.0 0.516 H -86.5 -30.8 98.0 0.516 0.0 JDG
EDO
HOH
 6.924
6.199
2.627
 N
N
OE2
 C07
O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h9b1-f1 1 Q9H9B1 100.0 0.0 GLU A:1244 A:1244 68.0 0.358 H -71.6 -32.0