Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 33113781 . T A CCDS6535.1:NM_001497.3:c.1055aAt>aTt_NP_001488.2:p.352N>I Homo sapiens beta-1,4-galactosyltransferase 1 (B4GALT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6fwt 1 P15291 100.0 0.0 X-RAY
 2018-10-10 ASN A:231 A:352 68.0 0.425 -63.8 137.6 68.0 0.425 0.0 HOH
 2.737
 OD1
 O
6fwu 1 P15291 100.0 0.0 X-RAY
 2018-10-10 ASN A:227 NA:NA DO NA DO DO DO NA NA NA
ASN B:227 NA:NA DO NA DO DO DO NA NA NA
4l41 2 P15291 99.27 0.0 X-RAY
 2013-10-02 ASN B:241 C:352 7.0 0.044 -71.2 118.0 7.0 0.044 0.0 HOH
 3.203
 ND2
 O
2ae7 1 P15291 98.9 0.0 X-RAY
 2005-10-04 ASN A:241 A:352 11.0 0.069 -80.2 109.5 11.0 0.069 0.0 MAN
NAG
GOL
HOH
 9.759
6.469
7.736
3.090
 O
O
N
ND2
 O2
O7
O1
O
ASN B:241 B:352 8.0 0.05 -77.1 113.5 NA NA NA
ASN C:241 C:352 10.0 0.062 -72.2 107.4 NA NA NA
2aec 1 P15291 98.9 0.0 X-RAY
 2005-10-04 ASN A:241 A:352 10.0 0.062 -77.2 114.7 10.0 0.062 0.0 MAN
NAG
GOL
HOH
 9.645
6.429
7.796
3.004
 O
O
N
ND2
 C6
O7
O1
O
ASN B:241 B:352 8.0 0.05 -75.5 114.2 NA NA NA
ASN C:241 C:352 14.0 0.087 -79.0 109.6 NA NA NA
2aes 1 P15291 98.9 0.0 X-RAY
 2005-10-04 ASN A:241 A:352 9.0 0.056 -77.1 114.2 9.0 0.056 0.0 BMA
MAN
NAG
GOL
HOH
 9.647
8.847
6.358
7.832
2.952
 O
O
O
N
ND2
 O4
O6
O7
O1
O
ASN B:241 B:352 9.0 0.056 -74.7 115.6 NA NA NA
ASN C:241 C:352 12.0 0.075 -78.9 110.4 NA NA NA
2agd 1 P15291 98.9 0.0 X-RAY
 2005-10-04 ASN A:241 A:352 10.0 0.062 -74.7 112.7 10.0 0.062 0.0 BMA
MAN
NAG
GOL
HOH
 8.695
9.729
6.533
7.843
2.612
 O
O
O
N
ND2
 O1
O4
O7
O1
O
ASN B:241 B:352 8.0 0.05 -76.6 113.9 NA NA NA
ASN C:241 C:352 12.0 0.075 -78.0 113.3 NA NA NA
2ah9 1 P15291 98.9 0.0 X-RAY
 2005-10-04 ASN A:241 A:352 10.0 0.062 -77.8 114.5 10.0 0.062 0.0 NAG
NAG
GOL
HOH
 9.755
6.564
7.826
2.646
 O
O
N
ND2
 O4
O7
O1
O
ASN B:241 B:352 9.0 0.056 -76.3 113.6 NA NA NA
ASN C:241 C:352 10.0 0.062 -73.7 109.7 NA NA NA
2fy7 1 P15291 98.9 0.0 X-RAY
 2006-03-14 ASN A:241 A:352 137.0 0.856 360.0 112.7 137.0 0.856 0.0 HOH
 2.660
 ND2
 O
2fya 1 P15291 98.9 0.0 X-RAY
 2006-03-14 ASN A:241 A:352 129.0 0.806 360.0 142.6 129.0 0.806 0.0 HOH
 2.709
 N
 O
2fyb 1 P15291 98.9 0.0 X-RAY
 2006-03-14 ASN A:241 A:352 79.0 0.494 -31.8 125.4 79.0 0.494 0.0 UDP
HOH
 9.950
2.679
 C
OD1
 O2B
O
3ee5 1 P15291 98.9 0.0 X-RAY
 2009-01-06 ASN A:241 A:352 9.0 0.056 -78.4 113.5 9.0 0.056 0.0 GAL
NAG
GOL
HOH
 9.697
6.640
7.547
3.117
 O
O
N
ND2
 O3
O7
O1
O
ASN B:241 B:352 8.0 0.05 -78.0 118.4 NA NA NA
ASN C:241 C:352 11.0 0.069 -82.5 107.6 NA NA NA
4ee3 1 P15291 98.9 0.0 X-RAY
 2012-07-04 ASN A:241 A:352 12.0 0.075 -64.8 112.2 12.0 0.075 0.0 GAL
NAG
GAL
NAG
GOL
HOH
 7.626
6.649
8.544
6.440
8.055
3.152
 O
O
O
O
N
OD1
 O4
O7
O2
O7
O1
O
ASN B:241 B:352 8.0 0.05 -66.2 115.6 NA NA NA
ASN C:241 C:352 13.0 0.081 -97.1 122.6 NA NA NA
4ee4 1 P15291 98.9 0.0 X-RAY
 2012-07-04 ASN A:241 A:352 10.0 0.062 -78.9 112.8 10.0 0.062 0.0 GAL
NAG
NAG
UDP
SO4
GOL
HOH
 7.581
6.728
6.547
9.824
8.632
7.735
2.721
 O
O
O
N
ND2
N
ND2
 O4
O7
O7
O1B
O1
O2
O
ASN B:241 B:352 8.0 0.05 -81.4 112.9 NA NA NA
ASN C:241 C:352 10.0 0.062 -84.3 115.2 NA NA NA
4ee5 1 P15291 98.9 0.0 X-RAY
 2012-07-04 ASN A:241 A:352 10.0 0.062 -68.3 115.5 10.0 0.062 0.0 GAL
NAG
GOL
HOH
 9.292
6.708
7.862
2.619
 O
O
N
ND2
 O2
O7
O2
O
ASN B:241 B:352 11.0 0.069 -79.0 113.8 NA NA NA
ASN C:241 C:352 11.0 0.069 -86.0 119.9 NA NA NA
4eea 1 P15291 98.9 0.0 X-RAY
 2012-07-04 ASN A:241 A:352 10.0 0.062 -78.7 111.0 10.0 0.062 0.0 GAL
NAG
GOL
HOH
 7.574
6.515
7.831
2.549
 O
O
CB
ND2
 O4
O7
O2
O
ASN B:241 B:352 9.0 0.056 -79.7 115.9 NA NA NA
ASN C:241 C:352 10.0 0.062 -84.5 115.7 NA NA NA
4eeg 1 P15291 98.9 0.0 X-RAY
 2012-07-04 ASN A:241 A:352 9.0 0.056 -70.6 113.9 9.0 0.056 0.0 GAL
NAG
GOL
HOH
 9.744
6.689
7.861
2.607
 O
O
N
ND2
 O6
O7
O2
O
ASN B:241 B:352 8.0 0.05 -77.5 120.1 NA NA NA
ASN C:241 C:352 10.0 0.062 -106.4 119.3 NA NA NA
4eem 1 P15291 98.9 0.0 X-RAY
 2012-07-04 ASN A:241 A:352 10.0 0.062 -71.5 114.2 10.0 0.062 0.0 MMA
NAG
SO4
GOL
HOH
 9.512
6.693
8.972
8.019
2.535
 O
O
ND2
N
ND2
 O6
O7
O1
C1
O
ASN B:241 B:352 9.0 0.056 -78.7 113.2 NA NA NA
ASN C:241 C:352 9.0 0.056 -79.5 116.7 NA NA NA
4eeo 1 P15291 98.9 0.0 X-RAY
 2012-07-04 ASN A:241 A:352 7.0 0.044 -78.6 114.1 7.0 0.044 0.0 BBV
NAG
GOL
HOH
 9.591
6.692
7.724
3.222
 O
O
CB
ND2
 O6
O7
O1
O
ASN B:241 B:352 9.0 0.056 -74.0 106.9 NA NA NA
ASN C:241 C:352 10.0 0.062 -93.2 111.5 NA NA NA
1fr8 1 P08037 89.24 0.0 X-RAY
 2000-09-20 ASN A:242 A:356 114.0 0.713 -56.9 107.8 80.0 0.5 0.213 B:P08037:0.212
 HOH
 4.171
 OD1
 O
ASN B:242 B:356 91.0 0.569 -44.1 138.2 91.0 0.569 0.0 GDU
HOH
 9.339
6.690
 C
OD1
 O3B
O
1fgx 1 P08037 88.89 0.0 X-RAY
 2000-08-16 ASN A:242 A:356 116.0 0.725 -74.2 122.8 116.0 0.725 0.0 HOH
 9.896
 C
 O
ASN B:242 B:356 85.0 0.531 -56.6 134.7 NA NA NA
1nf5 2 P08037 90.48 0.0 X-RAY
 2002-12-25 ASN B:240 B:356 13.0 0.081 -80.8 114.5 13.0 0.081 0.0 PG4
BGC
HOH
 7.548
8.195
2.580
 N
O
O
 C4
O2
O
ASN D:240 D:356 9.0 0.056 -78.7 110.2 NA NA NA
1nhe 2 P08037 90.48 0.0 X-RAY
 2003-01-07 ASN B:240 B:356 10.0 0.062 -70.7 119.3 10.0 0.062 0.0 UDP
PG4
HOH
 9.902
7.753
2.642
 N
N
ND2
 O2A
C6
O
ASN D:240 D:356 5.0 0.031 -73.3 117.2 NA NA NA
1nkh 2 P08037 90.48 0.0 X-RAY
 2003-01-14 ASN B:240 B:356 6.0 0.037 -82.5 107.8 6.0 0.037 0.0 PG4
PG4
HOH
 7.936
8.465
2.707
 N
N
ND2
 C6
C5
O
ASN D:240 D:356 4.0 0.025 -76.6 124.4 NA NA NA
1nqi 2 P08037 90.48 0.0 X-RAY
 2003-02-04 ASN B:240 B:356 7.0 0.044 -72.9 107.7 7.0 0.044 0.0 NAG
HOH
 6.609
2.699
 O
OD1
 O7
O
ASN D:240 D:356 7.0 0.044 -75.8 112.7 NA NA NA
1nwg 2 P08037 90.48 0.0 X-RAY
 2003-02-18 ASN B:240 B:356 5.0 0.031 -66.6 114.2 5.0 0.031 0.0 BGN
HOH
 6.595
2.568
 O
OD1
 C8
O
ASN D:240 D:356 6.0 0.037 -79.0 106.2 NA NA NA
1o23 2 P08037 90.48 0.0 X-RAY
 2003-02-25 ASN B:240 B:356 7.0 0.044 -77.2 106.1 7.0 0.044 0.0 UPG
PG4
HOH
 9.335
8.235
2.676
 N
N
ND2
 C6'
C6
O
ASN D:240 D:758 5.0 0.031 -90.3 116.3 NA NA NA
1oqm 2 P08037 90.48 0.0 X-RAY
 2003-03-18 ASN B:240 B:356 7.0 0.044 -73.5 111.7 7.0 0.044 0.0 UD2
HOH
 7.648
2.689
 N
ND2
 O6'
O
ASN D:240 D:356 9.0 0.056 -84.4 109.6 NA NA NA
1nmm 2 P08037 90.11 0.0 X-RAY
 2003-01-21 ASN B:240 B:356 6.0 0.037 -74.6 114.6 6.0 0.037 0.0 NAG
HOH
 6.614
2.594
 O
OD1
 O7
O
ASN D:240 D:356 8.0 0.05 -73.4 113.7 NA NA NA
1o0r 1 P08037 90.11 0.0 X-RAY
 2003-03-04 ASN A:240 A:356 10.0 0.062 -91.2 110.0 10.0 0.062 0.0 GDU
HOH
 7.794
2.538
 N
OD1
 O6'
O
ASN B:240 B:356 11.0 0.069 -86.9 110.8 NA NA NA
1yro 2 P08037 89.74 0.0 X-RAY
 2005-03-22 ASN B:240 B:356 10.0 0.062 -74.5 115.7 10.0 0.062 0.0 MES
PG4
GDU
HOH
 7.871
7.833
7.713
2.633
 O
N
N
OD1
 C3
O4
O6'
O
ASN D:240 D:356 10.0 0.062 -75.5 115.2 NA NA NA
1tvy 1 P08037 89.74 0.0 X-RAY
 2004-12-14 ASN A:240 A:356 10.0 0.062 -81.9 107.5 10.0 0.062 0.0 GDU
HOH
 7.850
2.602
 N
OD1
 O6'
O
ASN B:240 B:356 9.0 0.056 -91.3 102.7 NA NA NA
1tw1 1 P08037 89.74 0.0 X-RAY
 2004-12-14 ASN A:240 A:356 14.0 0.087 -87.8 107.1 14.0 0.087 0.0 GDU
HOH
 7.923
2.705
 N
OD1
 O6'
O
ASN B:240 B:356 10.0 0.062 -81.5 116.8 NA NA NA
1tw5 1 P08037 89.74 0.0 X-RAY
 2004-12-14 ASN A:240 A:356 15.0 0.094 -87.7 108.1 15.0 0.094 0.0 NAG
NAG
HOH
 9.563
6.475
2.858
 O
O
OD1
 O4
O7
O
ASN B:240 B:356 9.0 0.056 -80.8 114.6 NA NA NA
2fyc 2 P08037 89.74 0.0 X-RAY
 2006-03-14 ASN B:240 B:356 10.0 0.062 -77.9 113.6 10.0 0.062 0.0 GDU
MES
HOH
 7.583
7.928
2.850
 CB
O
ND2
 O6'
C3
O
ASN D:240 D:356 9.0 0.056 -75.2 110.4 NA NA NA
4krv 1 P08037 89.74 0.0 X-RAY
 2013-08-28 ASN A:240 A:356 12.0 0.075 -76.3 114.5 12.0 0.075 0.0 UDH
NGS
SO4
SO4
HOH
 9.934
6.481
9.878
9.791
2.913
 N
O
OD1
N
ND2
 C1'
O7
O3
O3
O
ASN B:240 B:356 17.0 0.106 -75.1 118.3 NA NA NA
1pzt 1 P08037 89.74 0.0 X-RAY
 2003-09-16 ASN A:240 A:356 73.0 0.456 -55.4 152.6 73.0 0.456 0.0 HOH
 2.806
 N
 O
1pzy 2 P08037 89.74 0.0 X-RAY
 2003-09-02 ASN B:240 B:356 7.0 0.044 -83.7 110.6 7.0 0.044 0.0 NAG
HOH
 6.732
2.856
 O
ND2
 O7
O
ASN D:240 D:356 7.0 0.044 -67.8 113.1 NA NA NA
2fyd 2 21450879 89.38 0.0 X-RAY
 2006-03-14 ASN B:240 B:356 11.0 0.069 -78.7 116.7 11.0 0.069 0.0 PG4
MES
BGC
NGA
HOH
 7.791
7.787
8.286
7.761
2.942
 N
O
O
CB
ND2
 C5
C2
O2
O6
O
ASN D:240 D:356 9.0 0.056 -76.8 117.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p15291-f1 1 P15291 100.0 0.0 ASN A:352 A:352 6.0 0.037 -62.7 115.0