Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 33116056 . G A CCDS6535.1:NM_001497.3:c.892Cta>Tta_NP_001488.2:p.298L>L Homo sapiens beta-1,4-galactosyltransferase 1 (B4GALT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6fwt 1 P15291 100.0 0.0 X-RAY
 2018-10-10 LEU A:177 A:298 75.0 0.441 H -65.2 -39.5 75.0 0.441 0.0 HOH
 3.025
 O
 O
6fwu 1 P15291 100.0 0.0 X-RAY
 2018-10-10 LEU A:173 A:298 87.0 0.512 H -70.4 -28.4 87.0 0.512 0.0 HOH
 7.261
 HD11
 O
LEU B:173 B:298 86.0 0.506 H -70.0 -29.7 86.0 0.506 0.0
4l41 2 P15291 99.27 0.0 X-RAY
 2013-10-02 LEU B:187 C:298 69.0 0.406 H -78.3 -29.6 69.0 0.406 0.0 HOH
 3.117
 O
 O
2ae7 1 P15291 98.9 0.0 X-RAY
 2005-10-04 LEU A:187 A:298 88.0 0.518 H -64.5 -38.5 88.0 0.518 0.0 HOH
 2.708
 O
 O
LEU B:187 B:298 70.0 0.412 H -59.5 -37.3 NA NA NA
LEU C:187 C:298 67.0 0.394 H -64.5 -41.9 NA NA NA
2aec 1 P15291 98.9 0.0 X-RAY
 2005-10-04 LEU A:187 A:298 72.0 0.424 H -63.8 -37.9 72.0 0.424 0.0 HOH
 2.712
 O
 O
LEU B:187 B:298 68.0 0.4 H -62.4 -38.3 NA NA NA
LEU C:187 C:298 68.0 0.4 H -62.4 -40.8 NA NA NA
2aes 1 P15291 98.9 0.0 X-RAY
 2005-10-04 LEU A:187 A:298 73.0 0.429 H -63.8 -40.6 73.0 0.429 0.0 GOL
HOH
 6.604
2.821
 C
O
 O2
O
LEU B:187 B:298 70.0 0.412 H -60.1 -40.8 NA NA NA
LEU C:187 C:298 68.0 0.4 H -65.6 -37.7 NA NA NA
2agd 1 P15291 98.9 0.0 X-RAY
 2005-10-04 LEU A:187 A:298 74.0 0.435 H -64.4 -37.5 74.0 0.435 0.0 GOL
HOH
 6.700
2.739
 C
O
 O2
O
LEU B:187 B:298 70.0 0.412 H -62.5 -36.5 NA NA NA
LEU C:187 C:298 69.0 0.406 H -66.5 -36.9 NA NA NA
2ah9 1 P15291 98.9 0.0 X-RAY
 2005-10-04 LEU A:187 A:298 71.0 0.418 H -62.7 -40.9 71.0 0.418 0.0 GOL
HOH
 6.602
2.775
 C
O
 O2
O
LEU B:187 B:298 71.0 0.418 H -61.0 -37.3 NA NA NA
LEU C:187 C:298 68.0 0.4 H -65.6 -41.5 NA NA NA
2fy7 1 P15291 98.9 0.0 X-RAY
 2006-03-14 LEU A:187 A:298 83.0 0.488 H -64.0 -36.0 83.0 0.488 0.0 HOH
 2.623
 O
 O
2fya 1 P15291 98.9 0.0 X-RAY
 2006-03-14 LEU A:187 A:298 83.0 0.488 H -61.4 -38.3 83.0 0.488 0.0 HOH
 2.512
 O
 O
2fyb 1 P15291 98.9 0.0 X-RAY
 2006-03-14 LEU A:187 A:298 84.0 0.494 H -63.0 -38.7 84.0 0.494 0.0 HOH
 2.627
 O
 O
3ee5 1 P15291 98.9 0.0 X-RAY
 2009-01-06 LEU A:187 A:298 70.0 0.412 H -68.5 -35.4 70.0 0.412 0.0 HOH
 2.794
 O
 O
LEU B:187 B:298 67.0 0.394 H -61.6 -38.8 NA NA NA
LEU C:187 C:298 67.0 0.394 H -63.2 -42.2 NA NA NA
4ee3 1 P15291 98.9 0.0 X-RAY
 2012-07-04 LEU A:187 A:298 72.0 0.424 H -63.0 -41.7 72.0 0.424 0.0 HOH
 2.908
 O
 O
LEU B:187 B:298 69.0 0.406 H -66.0 -37.0 NA NA NA
LEU C:187 C:298 69.0 0.406 H -67.2 -37.9 NA NA NA
4ee4 1 P15291 98.9 0.0 X-RAY
 2012-07-04 LEU A:187 A:298 73.0 0.429 H -65.3 -37.5 73.0 0.429 0.0 HOH
 2.532
 O
 O
LEU B:187 B:298 70.0 0.412 H -62.7 -36.5 NA NA NA
LEU C:187 C:298 65.0 0.382 H -64.8 -39.7 NA NA NA
4ee5 1 P15291 98.9 0.0 X-RAY
 2012-07-04 LEU A:187 A:298 73.0 0.429 H -67.2 -34.2 73.0 0.429 0.0 HOH
 2.616
 O
 O
LEU B:187 B:298 69.0 0.406 H -63.0 -38.5 NA NA NA
LEU C:187 C:298 69.0 0.406 H -69.7 -29.6 NA NA NA
4eea 1 P15291 98.9 0.0 X-RAY
 2012-07-04 LEU A:187 A:298 73.0 0.429 H -60.7 -41.0 73.0 0.429 0.0 HOH
 2.695
 O
 O
LEU B:187 B:298 70.0 0.412 H -63.3 -35.1 NA NA NA
LEU C:187 C:298 68.0 0.4 H -64.3 -38.3 NA NA NA
4eeg 1 P15291 98.9 0.0 X-RAY
 2012-07-04 LEU A:187 A:298 72.0 0.424 H -65.4 -39.7 72.0 0.424 0.0 HOH
 2.706
 O
 O
LEU B:187 B:298 67.0 0.394 H -60.9 -40.2 NA NA NA
LEU C:187 C:298 67.0 0.394 H -64.9 -37.8 NA NA NA
4eem 1 P15291 98.9 0.0 X-RAY
 2012-07-04 LEU A:187 A:298 71.0 0.418 H -67.2 -37.6 71.0 0.418 0.0 HOH
 2.827
 O
 O
LEU B:187 B:298 70.0 0.412 H -63.5 -38.7 NA NA NA
LEU C:187 C:298 70.0 0.412 H -63.5 -36.5 NA NA NA
4eeo 1 P15291 98.9 0.0 X-RAY
 2012-07-04 LEU A:187 A:298 75.0 0.441 H -63.6 -34.3 75.0 0.441 0.0 HOH
 4.139
 CD1
 O
LEU B:187 B:298 65.0 0.382 H -67.3 -37.8 NA NA NA
LEU C:187 C:298 72.0 0.424 H -70.9 -37.5 NA NA NA
1fr8 1 P08037 89.24 0.0 X-RAY
 2000-09-20 LEU A:188 A:302 63.0 0.371 H -55.6 -47.4 63.0 0.371 0.0 HOH
 6.497
 CD2
 O
LEU B:188 B:302 64.0 0.376 H -55.4 -48.8 64.0 0.376 0.0 HOH
 7.146
 CD2
 O
1fgx 1 P08037 88.89 0.0 X-RAY
 2000-08-16 LEU A:188 A:302 70.0 0.412 H -62.5 -40.5 70.0 0.412 0.0 HOH
 4.271
 O
 O
LEU B:188 B:302 69.0 0.406 H -54.4 -43.0 NA NA NA
1nf5 2 P08037 90.48 0.0 X-RAY
 2002-12-25 LEU B:186 B:302 79.0 0.465 H -60.3 -39.3 79.0 0.465 0.0 HOH
 2.719
 O
 O
LEU D:186 D:302 66.0 0.388 H -65.5 -34.7 NA NA NA
1nhe 2 P08037 90.48 0.0 X-RAY
 2003-01-07 LEU B:186 B:302 62.0 0.365 H -55.3 -39.1 62.0 0.365 0.0 HOH
 2.602
 O
 O
LEU D:186 D:302 80.0 0.471 H -58.7 -49.6 NA NA NA
1nkh 2 P08037 90.48 0.0 X-RAY
 2003-01-14 LEU B:186 B:302 67.0 0.394 H -55.4 -38.5 67.0 0.394 0.0 HOH
 2.817
 O
 O
LEU D:186 D:302 80.0 0.471 H -62.6 -41.2 NA NA NA
1nqi 2 P08037 90.48 0.0 X-RAY
 2003-02-04 LEU B:186 B:302 77.0 0.453 H -62.7 -36.6 77.0 0.453 0.0 HOH
 2.767
 O
 O
LEU D:186 D:302 78.0 0.459 H -65.2 -28.4 NA NA NA
1nwg 2 P08037 90.48 0.0 X-RAY
 2003-02-18 LEU B:186 B:302 81.0 0.476 H -68.9 -32.4 81.0 0.476 0.0 HOH
 3.508
 O
 O
LEU D:186 D:302 88.0 0.518 H -73.3 -23.8 NA NA NA
1o23 2 P08037 90.48 0.0 X-RAY
 2003-02-25 LEU B:186 B:302 65.0 0.382 H -65.1 -33.8 65.0 0.382 0.0 HOH
 2.661
 O
 O
LEU D:186 D:704 85.0 0.5 H -71.6 -43.0 NA NA NA
1oqm 2 P08037 90.48 0.0 X-RAY
 2003-03-18 LEU B:186 B:302 84.0 0.494 H -60.5 -45.5 84.0 0.494 0.0 HOH
 2.619
 O
 O
LEU D:186 D:302 67.0 0.394 H -65.0 -37.2 NA NA NA
1nmm 2 P08037 90.11 0.0 X-RAY
 2003-01-21 LEU B:186 B:302 79.0 0.465 H -59.3 -41.1 79.0 0.465 0.0 HOH
 2.793
 O
 O
LEU D:186 D:302 63.0 0.371 H -64.3 -36.1 NA NA NA
1o0r 1 P08037 90.11 0.0 X-RAY
 2003-03-04 LEU A:186 A:302 71.0 0.418 H -63.7 -36.5 71.0 0.418 0.0 HOH
 3.925
 CB
 O
LEU B:186 B:302 65.0 0.382 H -59.2 -40.8 NA NA NA
1yro 2 P08037 89.74 0.0 X-RAY
 2005-03-22 LEU B:186 B:302 83.0 0.488 H -63.4 -40.4 83.0 0.488 0.0 HOH
 2.643
 O
 O
LEU D:186 D:302 64.0 0.376 H -64.3 -39.4 NA NA NA
1tvy 1 P08037 89.74 0.0 X-RAY
 2004-12-14 LEU A:186 A:302 63.0 0.371 H -60.9 -36.9 63.0 0.371 0.0 HOH
 2.783
 O
 O
LEU B:186 B:302 88.0 0.518 H -61.1 -38.5 NA NA NA
1tw1 1 P08037 89.74 0.0 X-RAY
 2004-12-14 LEU A:186 A:302 64.0 0.376 H -62.3 -45.9 64.0 0.376 0.0 HOH
 3.248
 O
 O
LEU B:186 B:302 91.0 0.535 H -65.4 -32.0 NA NA NA
1tw5 1 P08037 89.74 0.0 X-RAY
 2004-12-14 LEU A:186 A:302 74.0 0.435 H -61.9 -36.3 74.0 0.435 0.0 HOH
 6.584
 O
 O
LEU B:186 B:302 90.0 0.529 H -69.8 -36.3 NA NA NA
2fyc 2 P08037 89.74 0.0 X-RAY
 2006-03-14 LEU B:186 B:302 84.0 0.494 H -61.9 -39.0 84.0 0.494 0.0 HOH
 2.676
 O
 O
LEU D:186 D:302 68.0 0.4 H -62.2 -39.5 NA NA NA
4krv 1 P08037 89.74 0.0 X-RAY
 2013-08-28 LEU A:186 A:302 75.0 0.441 H -62.1 -34.0 75.0 0.441 0.0 HOH
 3.864
 CB
 O
LEU B:186 B:302 69.0 0.406 H -59.2 -35.6 NA NA NA
1pzt 1 P08037 89.74 0.0 X-RAY
 2003-09-16 LEU A:186 A:302 74.0 0.435 H -63.2 -33.8 74.0 0.435 0.0 HOH
 4.064
 CB
 O
1pzy 2 P08037 89.74 0.0 X-RAY
 2003-09-02 LEU B:186 B:302 88.0 0.518 H -59.2 -36.4 88.0 0.518 0.0 HOH
 3.399
 CB
 O
LEU D:186 D:302 64.0 0.376 H -60.3 -34.4 NA NA NA
2fyd 2 21450879 89.38 0.0 X-RAY
 2006-03-14 LEU B:186 B:302 66.0 0.388 H -56.1 -40.9 66.0 0.388 0.0 HOH
 2.596
 O
 O
LEU D:186 D:302 83.0 0.488 H -63.9 -38.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p15291-f1 1 P15291 100.0 0.0 LEU A:298 A:298 83.0 0.488 H -62.1 -37.1