Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr9 | 33120496 | . | G | A | CCDS6535.1:NM_001497.3:c.757Cca>Tca_NP_001488.2:p.253P>S | Homo sapiens beta-1,4-galactosyltransferase 1 (B4GALT1), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6fwt | 1 | P15291 | 100.0 | 0.0 |
X-RAY |
2018-10-10 | PRO | A:132 | A:253 | 1.0 | 0.007 | E | -74.4 | 148.5 | 1.0 | 0.007 | 0.0 |
HOH |
2.917 |
HB2 |
O |
||
| 6fwu | 1 | P15291 | 100.0 | 0.0 |
X-RAY |
2018-10-10 | PRO | A:128 | A:253 | 1.0 | 0.007 | E | -77.1 | 136.9 | 1.0 | 0.007 | 0.0 |
HOH |
2.913 |
HB2 |
O |
||
| PRO | B:128 | B:253 | 2.0 | 0.014 | E | -76.1 | 136.3 | 2.0 | 0.014 | 0.0 |
HOH |
2.994 |
HB2 |
O |
|||||||||
| 4l41 | 2 | P15291 | 99.27 | 0.0 |
X-RAY |
2013-10-02 | PRO | B:142 | C:253 | 1.0 | 0.007 | E | -76.7 | 147.1 | 1.0 | 0.007 | 0.0 |
HOH |
3.305 |
CB |
O |
||
| 2ae7 | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2005-10-04 | PRO | A:142 | A:253 | 2.0 | 0.014 | E | -71.2 | 143.7 | 2.0 | 0.014 | 0.0 |
HOH |
2.862 |
O |
O |
||
| PRO | B:142 | B:253 | 2.0 | 0.014 | E | -70.7 | 143.9 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 2.0 | 0.014 | E | -74.6 | 140.4 | NA | NA | NA | |||||||||||||
| 2aec | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2005-10-04 | PRO | A:142 | A:253 | 3.0 | 0.021 | E | -71.7 | 142.8 | 3.0 | 0.021 | 0.0 |
HOH |
2.980 |
O |
O |
||
| PRO | B:142 | B:253 | 1.0 | 0.007 | E | -72.6 | 144.3 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 3.0 | 0.021 | E | -77.0 | 145.5 | NA | NA | NA | |||||||||||||
| 2aes | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2005-10-04 | PRO | A:142 | A:253 | 1.0 | 0.007 | E | -73.9 | 144.5 | 1.0 | 0.007 | 0.0 |
HOH |
2.905 |
O |
O |
||
| PRO | B:142 | B:253 | 1.0 | 0.007 | E | -73.1 | 145.6 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 3.0 | 0.021 | E | -77.2 | 143.9 | NA | NA | NA | |||||||||||||
| 2agd | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2005-10-04 | PRO | A:142 | A:253 | 2.0 | 0.014 | E | -71.6 | 146.5 | 2.0 | 0.014 | 0.0 |
HOH |
2.977 |
O |
O |
||
| PRO | B:142 | B:253 | 1.0 | 0.007 | E | -70.9 | 142.8 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 2.0 | 0.014 | E | -76.5 | 143.9 | NA | NA | NA | |||||||||||||
| 2ah9 | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2005-10-04 | PRO | A:142 | A:253 | 3.0 | 0.021 | E | -71.1 | 143.2 | 3.0 | 0.021 | 0.0 |
HOH |
2.935 |
O |
O |
||
| PRO | B:142 | B:253 | 2.0 | 0.014 | E | -71.0 | 142.1 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 3.0 | 0.021 | E | -75.4 | 144.6 | NA | NA | NA | |||||||||||||
| 2fy7 | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2006-03-14 | PRO | A:142 | A:253 | 2.0 | 0.014 | E | -72.2 | 144.1 | 2.0 | 0.014 | 0.0 |
HOH |
2.957 |
O |
O |
||
| 2fya | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2006-03-14 | PRO | A:142 | A:253 | 2.0 | 0.014 | E | -72.9 | 144.7 | 2.0 | 0.014 | 0.0 |
HOH |
3.051 |
O |
O |
||
| 2fyb | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2006-03-14 | PRO | A:142 | A:253 | 2.0 | 0.014 | E | -71.6 | 147.0 | 2.0 | 0.014 | 0.0 |
HOH |
3.069 |
O |
O |
||
| 3ee5 | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2009-01-06 | PRO | A:142 | A:253 | 1.0 | 0.007 | E | -72.8 | 139.6 | 1.0 | 0.007 | 0.0 |
HOH |
2.862 |
O |
O |
||
| PRO | B:142 | B:253 | 1.0 | 0.007 | E | -71.3 | 147.0 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 3.0 | 0.021 | E | -76.4 | 148.6 | NA | NA | NA | |||||||||||||
| 4ee3 | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2012-07-04 | PRO | A:142 | A:253 | 2.0 | 0.014 | E | -80.1 | 138.7 | 2.0 | 0.014 | 0.0 |
HOH |
3.527 |
CB |
O |
||
| PRO | B:142 | B:253 | 2.0 | 0.014 | E | -73.1 | 145.8 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 2.0 | 0.014 | E | -73.4 | 148.3 | NA | NA | NA | |||||||||||||
| 4ee4 | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2012-07-04 | PRO | A:142 | A:253 | 2.0 | 0.014 | E | -75.1 | 143.0 | 2.0 | 0.014 | 0.0 |
HOH |
2.922 |
O |
O |
||
| PRO | B:142 | B:253 | 1.0 | 0.007 | E | -70.4 | 140.4 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 3.0 | 0.021 | E | -67.8 | 138.7 | NA | NA | NA | |||||||||||||
| 4ee5 | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2012-07-04 | PRO | A:142 | A:253 | 2.0 | 0.014 | E | -78.9 | 144.1 | 2.0 | 0.014 | 0.0 |
HOH |
3.036 |
O |
O |
||
| PRO | B:142 | B:253 | 3.0 | 0.021 | E | -72.1 | 146.9 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 2.0 | 0.014 | E | -79.3 | 147.9 | NA | NA | NA | |||||||||||||
| 4eea | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2012-07-04 | PRO | A:142 | A:253 | 3.0 | 0.021 | E | -74.8 | 143.4 | 3.0 | 0.021 | 0.0 |
HOH |
2.935 |
O |
O |
||
| PRO | B:142 | B:253 | 1.0 | 0.007 | E | -73.3 | 141.2 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 3.0 | 0.021 | E | -76.5 | 143.7 | NA | NA | NA | |||||||||||||
| 4eeg | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2012-07-04 | PRO | A:142 | A:253 | 2.0 | 0.014 | E | -75.5 | 148.3 | 2.0 | 0.014 | 0.0 |
HOH |
2.998 |
O |
O |
||
| PRO | B:142 | B:253 | 1.0 | 0.007 | E | -70.2 | 141.9 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 4.0 | 0.028 | E | -73.8 | 148.8 | NA | NA | NA | |||||||||||||
| 4eem | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2012-07-04 | PRO | A:142 | A:253 | 2.0 | 0.014 | E | -76.8 | 140.4 | 2.0 | 0.014 | 0.0 |
HOH |
2.904 |
O |
O |
||
| PRO | B:142 | B:253 | 2.0 | 0.014 | E | -72.4 | 146.3 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 2.0 | 0.014 | E | -75.8 | 143.4 | NA | NA | NA | |||||||||||||
| 4eeo | 1 | P15291 | 98.9 | 0.0 |
X-RAY |
2012-07-04 | PRO | A:142 | A:253 | 2.0 | 0.014 | E | -74.0 | 149.3 | 2.0 | 0.014 | 0.0 |
HOH |
3.070 |
O |
O |
||
| PRO | B:142 | B:253 | 2.0 | 0.014 | E | -69.8 | 146.2 | NA | NA | NA | |||||||||||||
| PRO | C:142 | C:253 | 4.0 | 0.028 | E | -78.7 | 151.1 | NA | NA | NA | |||||||||||||
| 1fr8 | 1 | P08037 | 89.24 | 0.0 |
X-RAY |
2000-09-20 | PRO | A:143 | A:257 | 0.0 | 0.0 | E | -77.5 | 133.1 | 0.0 | 0.0 | 0.0 |
HOH |
3.452 |
C |
O |
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| PRO | B:143 | B:257 | 0.0 | 0.0 | E | -79.7 | 144.2 | 0.0 | 0.0 | 0.0 |
HOH |
3.457 |
CB |
O |
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| 1fgx | 1 | P08037 | 88.89 | 0.0 |
X-RAY |
2000-08-16 | PRO | A:143 | A:257 | 0.0 | 0.0 | E | -75.6 | 144.8 | 0.0 | 0.0 | 0.0 |
HOH |
3.537 |
CB |
O |
||
| PRO | B:143 | B:257 | 0.0 | 0.0 | E | -75.5 | 150.8 | NA | NA | NA | |||||||||||||
| 1nf5 | 2 | P08037 | 90.48 | 0.0 |
X-RAY |
2002-12-25 | PRO | B:141 | B:257 | 1.0 | 0.007 | E | -75.6 | 140.8 | 1.0 | 0.007 | 0.0 |
HOH |
3.538 |
CB |
O |
||
| PRO | D:141 | D:257 | 0.0 | 0.0 | E | -78.3 | 147.1 | NA | NA | NA | |||||||||||||
| 1nhe | 2 | P08037 | 90.48 | 0.0 |
X-RAY |
2003-01-07 | PRO | B:141 | B:257 | 0.0 | 0.0 | E | -73.4 | 135.7 | 0.0 | 0.0 | 0.0 |
HOH |
3.677 |
CB |
O |
||
| PRO | D:141 | D:257 | 0.0 | 0.0 | E | -67.3 | 143.4 | NA | NA | NA | |||||||||||||
| 1nkh | 2 | P08037 | 90.48 | 0.0 |
X-RAY |
2003-01-14 | PRO | B:141 | B:257 | 0.0 | 0.0 | E | -72.0 | 144.1 | 0.0 | 0.0 | 0.0 |
HOH |
3.444 |
CB |
O |
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| PRO | D:141 | D:257 | 1.0 | 0.007 | E | -68.4 | 146.5 | NA | NA | NA | |||||||||||||
| 1nqi | 2 | P08037 | 90.48 | 0.0 |
X-RAY |
2003-02-04 | PRO | B:141 | B:257 | 0.0 | 0.0 | E | -74.8 | 137.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.464 |
CB |
O |
||
| PRO | D:141 | D:257 | 2.0 | 0.014 | E | -59.4 | 148.6 | NA | NA | NA | |||||||||||||
| 1nwg | 2 | P08037 | 90.48 | 0.0 |
X-RAY |
2003-02-18 | PRO | B:141 | B:257 | 1.0 | 0.007 | E | -71.4 | 135.5 | 1.0 | 0.007 | 0.0 |
HOH |
3.822 |
CB |
O |
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| PRO | D:141 | D:257 | 2.0 | 0.014 | E | -57.8 | 165.9 | NA | NA | NA | |||||||||||||
| 1o23 | 2 | P08037 | 90.48 | 0.0 |
X-RAY |
2003-02-25 | PRO | B:141 | B:257 | 1.0 | 0.007 | E | -69.2 | 138.4 | 1.0 | 0.007 | 0.0 |
HOH |
3.573 |
CB |
O |
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| PRO | D:141 | D:659 | 1.0 | 0.007 | E | -71.5 | 143.3 | NA | NA | NA | |||||||||||||
| 1oqm | 2 | P08037 | 90.48 | 0.0 |
X-RAY |
2003-03-18 | PRO | B:141 | B:257 | 0.0 | 0.0 | E | -77.9 | 138.1 | 0.0 | 0.0 | 0.0 |
HOH |
3.599 |
CB |
O |
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| PRO | D:141 | D:257 | 0.0 | 0.0 | E | -72.6 | 141.9 | NA | NA | NA | |||||||||||||
| 1nmm | 2 | P08037 | 90.11 | 0.0 |
X-RAY |
2003-01-21 | PRO | B:141 | B:257 | 0.0 | 0.0 | E | -72.8 | 138.6 | 0.0 | 0.0 | 0.0 |
HOH |
3.510 |
CB |
O |
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| PRO | D:141 | D:257 | 0.0 | 0.0 | E | -70.8 | 143.5 | NA | NA | NA | |||||||||||||
| 1o0r | 1 | P08037 | 90.11 | 0.0 |
X-RAY |
2003-03-04 | PRO | A:141 | A:257 | 0.0 | 0.0 | E | -76.4 | 138.3 | 0.0 | 0.0 | 0.0 |
HOH |
3.737 |
CB |
O |
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| PRO | B:141 | B:257 | 0.0 | 0.0 | E | -78.6 | 148.5 | NA | NA | NA | |||||||||||||
| 1yro | 2 | P08037 | 89.74 | 0.0 |
X-RAY |
2005-03-22 | PRO | B:141 | B:257 | 0.0 | 0.0 | E | -73.6 | 142.9 | 0.0 | 0.0 | 0.0 |
HOH |
3.367 |
CB |
O |
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| PRO | D:141 | D:257 | 0.0 | 0.0 | E | -74.7 | 146.0 | NA | NA | NA | |||||||||||||
| 1tvy | 1 | P08037 | 89.74 | 0.0 |
X-RAY |
2004-12-14 | PRO | A:141 | A:257 | 0.0 | 0.0 | E | -70.3 | 141.3 | 0.0 | 0.0 | 0.0 |
HOH |
3.508 |
CB |
O |
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| PRO | B:141 | B:257 | 0.0 | 0.0 | E | -70.9 | 138.6 | NA | NA | NA | |||||||||||||
| 1tw1 | 1 | P08037 | 89.74 | 0.0 |
X-RAY |
2004-12-14 | PRO | A:141 | A:257 | 0.0 | 0.0 | E | -68.2 | 146.8 | 0.0 | 0.0 | 0.0 |
HOH |
3.332 |
CB |
O |
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| PRO | B:141 | B:257 | 0.0 | 0.0 | E | -73.0 | 143.3 | NA | NA | NA | |||||||||||||
| 1tw5 | 1 | P08037 | 89.74 | 0.0 |
X-RAY |
2004-12-14 | PRO | A:141 | A:257 | 0.0 | 0.0 | E | -67.2 | 141.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.464 |
CB |
O |
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| PRO | B:141 | B:257 | 0.0 | 0.0 | E | -76.4 | 139.7 | NA | NA | NA | |||||||||||||
| 2fyc | 2 | P08037 | 89.74 | 0.0 |
X-RAY |
2006-03-14 | PRO | B:141 | B:257 | 0.0 | 0.0 | E | -73.7 | 145.7 | 0.0 | 0.0 | 0.0 |
HOH |
3.364 |
CB |
O |
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| PRO | D:141 | D:257 | 0.0 | 0.0 | E | -71.8 | 142.1 | NA | NA | NA | |||||||||||||
| 4krv | 1 | P08037 | 89.74 | 0.0 |
X-RAY |
2013-08-28 | PRO | A:141 | A:257 | 0.0 | 0.0 | E | -69.0 | 144.3 | 0.0 | 0.0 | 0.0 |
HOH |
3.406 |
CB |
O |
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| PRO | B:141 | B:257 | 0.0 | 0.0 | E | -68.8 | 138.4 | NA | NA | NA | |||||||||||||
| 1pzt | 1 | P08037 | 89.74 | 0.0 |
X-RAY |
2003-09-16 | PRO | A:141 | A:257 | 1.0 | 0.007 | E | -73.5 | 147.6 | 1.0 | 0.007 | 0.0 |
HOH |
3.508 |
CB |
O |
||
| 1pzy | 2 | P08037 | 89.74 | 0.0 |
X-RAY |
2003-09-02 | PRO | B:141 | B:257 | 1.0 | 0.007 | E | -64.6 | 146.9 | 1.0 | 0.007 | 0.0 |
HOH |
3.683 |
CB |
O |
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| PRO | D:141 | D:257 | 1.0 | 0.007 | E | -70.9 | 131.3 | NA | NA | NA | |||||||||||||
| 2fyd | 2 | 21450879 | 89.38 | 0.0 |
X-RAY |
2006-03-14 | PRO | B:141 | B:257 | 1.0 | 0.007 | E | -73.7 | 145.3 | 1.0 | 0.007 | 0.0 |
HOH |
3.508 |
CB |
O |
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| PRO | D:141 | D:257 | 0.0 | 0.0 | E | -73.3 | 145.6 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p15291-f1 | 1 | P15291 | 100.0 | 0.0 | PRO | A:253 | A:253 | 2.0 | 0.014 | E | -71.7 | 142.2 | |