Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 33166776 . G A CCDS6535.1:NM_001497.3:c.392cCt>cTt_NP_001488.2:p.131P>L Homo sapiens beta-1,4-galactosyltransferase 1 (B4GALT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6fwt 1 P15291 100.0 0.0 X-RAY
 2018-10-10 PRO A:10 A:131 65.0 0.448 -56.8 154.6 65.0 0.448 0.0 HOH
 2.791
 O
 O
6fwu 1 P15291 100.0 0.0 X-RAY
 2018-10-10 PRO A:6 A:131 69.0 0.476 -61.3 165.9 69.0 0.476 0.0
PRO B:6 B:131 69.0 0.476 -59.7 163.7 69.0 0.476 0.0 HOH
 4.915
 O
 O
4l41 2 P15291 99.27 0.0 X-RAY
 2013-10-02 PRO B:20 C:131 68.0 0.469 -59.6 165.2 68.0 0.469 0.0
2ae7 1 P15291 98.9 0.0 X-RAY
 2005-10-04 PRO A:20 A:131 71.0 0.49 -66.1 157.3 71.0 0.49 0.0 HOH
 2.665
 O
 O
PRO B:20 B:131 74.0 0.51 -65.7 154.7 NA NA NA
PRO C:20 C:131 69.0 0.476 -58.3 153.5 NA NA NA
2aec 1 P15291 98.9 0.0 X-RAY
 2005-10-04 PRO A:20 A:131 71.0 0.49 -65.9 154.2 71.0 0.49 0.0 HOH
 2.562
 O
 O
PRO B:20 B:131 70.0 0.483 -61.1 151.5 NA NA NA
PRO C:20 C:131 72.0 0.497 -56.9 149.5 NA NA NA
2aes 1 P15291 98.9 0.0 X-RAY
 2005-10-04 PRO A:20 A:131 68.0 0.469 -67.5 152.3 68.0 0.469 0.0 HOH
 2.541
 O
 O
PRO B:20 B:131 71.0 0.49 -60.8 152.9 NA NA NA
PRO C:20 C:131 70.0 0.483 -58.5 151.7 NA NA NA
2agd 1 P15291 98.9 0.0 X-RAY
 2005-10-04 PRO A:20 A:131 70.0 0.483 -69.6 152.7 70.0 0.483 0.0 HOH
 2.562
 O
 O
PRO B:20 B:131 71.0 0.49 -62.7 155.8 NA NA NA
PRO C:20 C:131 72.0 0.497 -59.7 152.7 NA NA NA
2ah9 1 P15291 98.9 0.0 X-RAY
 2005-10-04 PRO A:20 A:131 70.0 0.483 -69.2 157.0 70.0 0.483 0.0 HOH
 2.679
 O
 O
PRO B:20 B:131 72.0 0.497 -65.5 158.5 NA NA NA
PRO C:20 C:131 73.0 0.503 -58.3 153.4 NA NA NA
2fy7 1 P15291 98.9 0.0 X-RAY
 2006-03-14 PRO A:20 A:131 69.0 0.476 -60.7 157.4 69.0 0.476 0.0 PGE
HOH
 9.586
2.711
 O
O
 C3
O
2fya 1 P15291 98.9 0.0 X-RAY
 2006-03-14 PRO A:20 A:131 68.0 0.469 -61.3 156.2 68.0 0.469 0.0 PGE
HOH
 9.538
2.738
 O
O
 C3
O
2fyb 1 P15291 98.9 0.0 X-RAY
 2006-03-14 PRO A:20 A:131 68.0 0.469 -63.4 158.2 68.0 0.469 0.0 HOH
 2.709
 O
 O
3ee5 1 P15291 98.9 0.0 X-RAY
 2009-01-06 PRO A:20 A:131 70.0 0.483 -69.9 155.8 70.0 0.483 0.0 HOH
 2.575
 O
 O
PRO B:20 B:131 71.0 0.49 -64.2 152.0 NA NA NA
PRO C:20 C:131 70.0 0.483 -58.9 146.1 NA NA NA
4ee3 1 P15291 98.9 0.0 X-RAY
 2012-07-04 PRO A:20 A:131 71.0 0.49 -58.7 149.1 71.0 0.49 0.0 HOH
 2.708
 O
 O
PRO B:20 B:131 73.0 0.503 -63.9 158.3 NA NA NA
PRO C:20 C:131 70.0 0.483 -57.1 153.3 NA NA NA
4ee4 1 P15291 98.9 0.0 X-RAY
 2012-07-04 PRO A:20 A:131 70.0 0.483 -55.5 150.6 70.0 0.483 0.0 HOH
 2.596
 O
 O
PRO B:20 B:131 68.0 0.469 -60.1 157.3 NA NA NA
PRO C:20 C:131 70.0 0.483 -54.7 148.6 NA NA NA
4ee5 1 P15291 98.9 0.0 X-RAY
 2012-07-04 PRO A:20 A:131 69.0 0.476 -54.3 151.9 69.0 0.476 0.0 HOH
 2.830
 O
 O
PRO B:20 B:131 71.0 0.49 -59.8 154.8 NA NA NA
PRO C:20 C:131 71.0 0.49 -50.2 146.0 NA NA NA
4eea 1 P15291 98.9 0.0 X-RAY
 2012-07-04 PRO A:20 A:131 70.0 0.483 -56.4 152.8 70.0 0.483 0.0 HOH
 2.648
 O
 O
PRO B:20 B:131 72.0 0.497 -55.6 152.7 NA NA NA
PRO C:20 C:131 73.0 0.503 -56.4 151.3 NA NA NA
4eeg 1 P15291 98.9 0.0 X-RAY
 2012-07-04 PRO A:20 A:131 69.0 0.476 -55.6 150.7 69.0 0.476 0.0 HOH
 2.933
 O
 O
PRO B:20 B:131 70.0 0.483 -55.8 158.6 NA NA NA
PRO C:20 C:131 71.0 0.49 -54.2 150.4 NA NA NA
4eem 1 P15291 98.9 0.0 X-RAY
 2012-07-04 PRO A:20 A:131 70.0 0.483 -57.7 154.4 70.0 0.483 0.0 HOH
 2.899
 O
 O
PRO B:20 B:131 76.0 0.524 -58.7 158.9 NA NA NA
PRO C:20 C:131 69.0 0.476 -55.7 151.7 NA NA NA
4eeo 1 P15291 98.9 0.0 X-RAY
 2012-07-04 PRO A:20 A:131 70.0 0.483 -67.6 160.1 70.0 0.483 0.0 HOH
 2.911
 O
 O
PRO B:20 B:131 72.0 0.497 -63.9 156.5 NA NA NA
PRO C:20 C:131 69.0 0.476 -51.5 156.7 NA NA NA
1fr8 1 P08037 89.24 0.0 X-RAY
 2000-09-20 PRO A:21 A:135 60.0 0.414 -73.9 152.1 60.0 0.414 0.0 HOH
 3.907
 O
 O
PRO B:21 B:135 63.0 0.434 -99.5 148.2 63.0 0.434 0.0 HOH
 8.354
 CD
 O
1fgx 1 P08037 88.89 0.0 X-RAY
 2000-08-16 PRO A:21 A:135 66.0 0.455 -45.9 177.7 66.0 0.455 0.0
PRO B:21 B:135 73.0 0.503 -80.3 161.7 NA NA NA
1nf5 2 P08037 90.48 0.0 X-RAY
 2002-12-25 PRO B:19 B:135 66.0 0.455 -60.8 149.9 66.0 0.455 0.0 HOH
 2.577
 O
 O
PRO D:19 D:135 70.0 0.483 -64.7 157.5 NA NA NA
1nhe 2 P08037 90.48 0.0 X-RAY
 2003-01-07 PRO B:19 B:135 69.0 0.476 -69.8 155.1 69.0 0.476 0.0 HOH
 2.676
 O
 O
PRO D:19 D:135 58.0 0.4 -55.7 148.7 NA NA NA
1nkh 2 P08037 90.48 0.0 X-RAY
 2003-01-14 PRO B:19 B:135 67.0 0.462 -71.1 144.9 67.0 0.462 0.0 HOH
 2.680
 O
 O
PRO D:19 D:135 56.0 0.386 -75.2 142.6 NA NA NA
1nqi 2 P08037 90.48 0.0 X-RAY
 2003-02-04 PRO B:19 B:135 69.0 0.476 -62.0 155.5 69.0 0.476 0.0 HOH
 2.720
 O
 O
PRO D:19 D:135 63.0 0.434 -54.8 155.9 NA NA NA
1nwg 2 P08037 90.48 0.0 X-RAY
 2003-02-18 PRO B:19 B:135 73.0 0.503 -65.9 160.2 73.0 0.503 0.0 HOH
 2.701
 O
 O
PRO D:19 D:135 65.0 0.448 -64.1 162.2 NA NA NA
1o23 2 P08037 90.48 0.0 X-RAY
 2003-02-25 PRO B:19 B:135 67.0 0.462 -62.9 158.1 67.0 0.462 0.0 HOH
 3.401
 CB
 O
PRO D:19 D:537 57.0 0.393 -68.8 139.8 NA NA NA
1oqm 2 P08037 90.48 0.0 X-RAY
 2003-03-18 PRO B:19 B:135 68.0 0.469 -57.9 161.1 68.0 0.469 0.0 HOH
 2.517
 O
 O
PRO D:19 D:135 69.0 0.476 -67.6 157.5 NA NA NA
1nmm 2 P08037 90.11 0.0 X-RAY
 2003-01-21 PRO B:19 B:135 70.0 0.483 -57.7 161.2 70.0 0.483 0.0 HOH
 2.833
 O
 O
PRO D:19 D:135 68.0 0.469 -61.7 157.6 NA NA NA
1o0r 1 P08037 90.11 0.0 X-RAY
 2003-03-04 PRO A:19 A:135 70.0 0.483 -57.7 156.8 70.0 0.483 0.0 HOH
 2.693
 O
 O
PRO B:19 B:135 66.0 0.455 -70.2 166.6 NA NA NA
1yro 2 P08037 89.74 0.0 X-RAY
 2005-03-22 PRO B:19 B:135 67.0 0.462 -66.8 155.6 67.0 0.462 0.0 HOH
 2.664
 O
 O
PRO D:19 D:135 68.0 0.469 -64.4 156.1 NA NA NA
1tvy 1 P08037 89.74 0.0 X-RAY
 2004-12-14 PRO A:19 A:135 68.0 0.469 -61.1 162.7 68.0 0.469 0.0 HOH
 2.553
 O
 O
PRO B:19 B:135 72.0 0.497 -62.2 164.3 NA NA NA
1tw1 1 P08037 89.74 0.0 X-RAY
 2004-12-14 PRO A:19 A:135 66.0 0.455 -69.3 156.9 66.0 0.455 0.0 DIO
HOH
 3.583
4.792
 CB
O
 C1'
O
PRO B:19 B:135 69.0 0.476 -54.2 156.4 NA NA NA
1tw5 1 P08037 89.74 0.0 X-RAY
 2004-12-14 PRO A:19 A:135 71.0 0.49 -63.0 159.4 71.0 0.49 0.0 DIO
HOH
 3.495
2.659
 CA
O
 C2'
O
PRO B:19 B:135 72.0 0.497 -60.1 166.0 NA NA NA
2fyc 2 P08037 89.74 0.0 X-RAY
 2006-03-14 PRO B:19 B:135 67.0 0.462 -65.2 154.7 67.0 0.462 0.0 HOH
 2.656
 O
 O
PRO D:19 D:135 67.0 0.462 -64.3 157.5 NA NA NA
4krv 1 P08037 89.74 0.0 X-RAY
 2013-08-28 PRO A:19 A:135 67.0 0.462 -61.4 149.4 67.0 0.462 0.0 SO4
HOH
 6.680
4.936
 CD
O
 O1
O
PRO B:19 B:135 84.0 0.579 -60.0 166.7 NA NA NA
1pzt 1 P08037 89.74 0.0 X-RAY
 2003-09-16 PRO A:19 A:135 69.0 0.476 -58.9 151.6 69.0 0.476 0.0 HOH
 2.856
 O
 O
1pzy 2 P08037 89.74 0.0 X-RAY
 2003-09-02 PRO B:19 B:135 66.0 0.455 -60.3 151.1 66.0 0.455 0.0 HOH
 3.296
 O
 O
PRO D:19 D:135 68.0 0.469 -75.2 153.3 NA NA NA
2fyd 2 21450879 89.38 0.0 X-RAY
 2006-03-14 PRO B:19 B:135 68.0 0.469 -64.7 162.5 68.0 0.469 0.0 HOH
 3.128
 O
 O
PRO D:19 D:135 71.0 0.49 -68.4 164.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p15291-f1 1 P15291 100.0 0.0 PRO A:131 A:131 69.0 0.476 -63.4 156.3