Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 5457364 . G A CCDS6464.1:NM_014143.3:c.338cGc>cAc_NP_054862.1:p.113R>H Homo sapiens CD274 molecule (CD274), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ius 2 Q9NZQ7 100.0 5e-168 X-RAY
2016-09-28 ARG C:97 C:113 102.0 0.453 E -138.9 128.7 44.0 0.196 0.257 A:Q15116:0.258
HOH
4.241
NH1
O
ARG D:97 D:113 96.0 0.427 E -139.4 124.9 NA NA NA
3bik 1 Q9NZQ7 100.0 7e-168 X-RAY
2008-02-26 ARG A:96 A:113 73.0 0.324 E -129.9 134.6 47.0 0.209 0.115 B:Q02242:0.116
HOH
3.621
NH1
O
3bis 1 Q9NZQ7 100.0 7e-168 X-RAY
2008-02-26 ARG A:96 A:113 61.0 0.271 E -135.0 135.6 61.0 0.271 0.0 HOH
4.916
CB
O
ARG B:96 B:113 58.0 0.258 E -137.5 142.2 NA NA NA
5jdr 1 Q9NZQ7 100.0 7e-168 X-RAY
2017-04-12 ARG A:97 A:113 88.0 0.391 E -102.7 135.7 88.0 0.391 0.0
ARG B:97 B:113 79.0 0.351 E -91.6 127.3 79.0 0.351 0.0
5grj 3 Q9NZQ7 100.0 3e-167 X-RAY
2016-11-02 ARG C:96 A:113 72.0 0.32 E -157.4 146.0 15.0 0.067 0.253 B:None:0.12
A:None:0.138
3sbw 2 Q9NZQ7 100.0 4e-167 X-RAY
2011-07-13 ARG C:96 C:113 98.0 0.436 E -117.6 136.5 35.0 0.156 0.28 B:Q02242:0.28
HOH
5.492
NH2
O
4z18 1 Q9NZQ7 100.0 4e-167 X-RAY
2015-04-15 ARG A:96 A:113 76.0 0.338 E -123.5 130.3 76.0 0.338 0.0 HOH
3.220
NH2
O
ARG B:96 B:113 64.0 0.284 E -145.8 132.7 64.0 0.284 0.0 HOH
3.316
NH1
O
6pv9 1 Q9NZQ7 100.0 4e-167 X-RAY
2020-01-01 ARG A:96 A:113 94.0 0.418 E -120.1 121.9 48.0 0.213 0.205 B:None:0.204
HOH
3.336
NE
O
3fn3 1 Q9NZQ7 100.0 2e-166 X-RAY
2009-12-29 ARG A:96 A:113 57.0 0.253 E -94.0 130.2 57.0 0.253 0.0
ARG B:96 B:113 48.0 0.213 E -114.2 138.3 48.0 0.213 0.0
5xj4 1 Q9NZQ7 100.0 2e-166 X-RAY
2018-04-25 ARG A:96 A:113 66.0 0.293 E -116.2 130.9 66.0 0.293 0.0 HOH
5.967
N
O
7c88 3 Q9NZQ7 100.0 2e-99 X-RAY
2021-04-14 ARG C:113 M:113 46.0 0.204 E -145.2 133.5 15.0 0.067 0.137 A:None:0.138
HOH
3.206
NH2
O
ARG F:113 C:113 59.0 0.262 E -137.2 137.0 NA NA NA
5j89 1 Q9NZQ7 100.0 6e-97 X-RAY
2016-04-27 ARG A:112 C:113 84.0 0.373 E -127.8 133.6 13.0 0.058 0.315 C:Q9NZQ7:0.316
6GX
HOH
7.784
2.421
NH1
NH1
C
O
ARG B:112 A:113 81.0 0.36 E -123.6 137.5 NA NA NA
ARG C:112 D:113 55.0 0.244 E -132.5 133.1 19.0 0.084 0.16 A:Q9NZQ7:0.16
6GX
HOH
8.701
3.423
O
CD
C15
O
ARG D:112 B:113 61.0 0.271 E -125.3 132.4 NA NA NA
5n2d 1 Q9NZQ7 100.0 6e-97 X-RAY
2017-06-28 ARG A:112 A:113 88.0 0.391 E -126.3 129.6 12.0 0.053 0.338 B:Q9NZQ7:0.338
8J8
HOH
7.442
2.507
NH1
NH1
C25
O
ARG B:112 B:113 56.0 0.249 E -141.4 129.2 22.0 0.098 0.151 A:Q9NZQ7:0.151
8J8
HOH
8.519
3.538
O
CD
C11
O
ARG C:112 C:113 45.0 0.2 E -127.6 132.5 11.0 0.049 0.151 D:Q9NZQ7:0.151
8J8
HOH
8.591
2.741
CB
NE
C
O
ARG D:112 D:113 56.0 0.249 E -129.3 126.3 14.0 0.062 0.187 C:Q9NZQ7:0.187
8J8
HOH
8.622
2.914
O
NE
C11
O
5o45 1 Q9NZQ7 100.0 5e-84 X-RAY
2017-09-20 ARG A:97 A:113 53.0 0.236 E -118.1 132.7 26.0 0.116 0.12 B:None:0.12
HOH
2.069
HH12
O
7oun 1 Q9NZQ7 100.0 5e-84 X-RAY
2021-09-15 ARG A:97 A:113 73.0 0.324 E -124.4 132.9 26.0 0.116 0.208 B:None:0.209
HOH
4.061
NH2
O
5j8o 1 Q9NZQ7 100.0 4e-83 X-RAY
2016-04-27 ARG A:96 A:113 57.0 0.253 E -135.9 131.4 15.0 0.067 0.186 B:Q9NZQ7:0.187
6GZ
HOH
8.744
6.553
O
NH2
C17
O
ARG B:96 B:113 82.0 0.364 E -130.2 131.1 11.0 0.049 0.315 A:Q9NZQ7:0.316
6GZ
HOH
7.928
4.187
NH1
NH2
C
O
5n2f 2 Q9NZQ7 100.0 4e-83 X-RAY
2017-06-28 ARG B:96 B:113 65.0 0.289 E -128.4 130.6 25.0 0.111 0.178 A:Q9NZQ7:0.178
HOH
9.113
O
O
6vqn 1 Q9NZQ7 100.0 4e-83 X-RAY
2021-01-20 ARG A:97 A:113 56.0 0.249 E -126.6 132.2 28.0 0.124 0.125 B:Q9NZQ7:0.124
R81
HOH
8.311
2.947
CD
NH2
C18
O
ARG B:97 B:113 52.0 0.231 E -135.4 128.0 27.0 0.12 0.111 A:Q9NZQ7:0.111
R81
HOH
8.154
3.321
CD
NE
C6
O
ARG C:97 C:113 59.0 0.262 E -133.3 135.2 NA NA NA
5niu 1 Q9NZQ7 100.0 4e-83 X-RAY
2017-12-06 ARG A:96 A:113 61.0 0.271 E -125.9 136.7 25.0 0.111 0.16 B:Q9NZQ7:0.16
8YZ
HOH
7.573
3.169
NE
NH2
C11
O
ARG B:96 B:113 77.0 0.342 E -129.2 135.4 14.0 0.062 0.28 A:Q9NZQ7:0.28
8YZ
EDO
HOH
7.757
7.773
2.315
NH2
NH2
NH1
C22
C2
O
ARG C:96 C:113 60.0 0.267 E -128.4 135.9 NA NA NA
ARG D:96 D:113 76.0 0.338 E -127.3 134.2 NA NA NA
6r3k 1 Q9NZQ7 100.0 4e-83 X-RAY
2019-04-03 ARG A:96 A:113 69.0 0.307 E -123.6 128.9 42.0 0.187 0.12 B:Q9NZQ7:0.12
JQT
HOH
6.353
2.877
CG
NH2
N01
O
ARG B:96 B:113 82.0 0.364 E -127.5 130.2 14.0 0.062 0.302 A:Q9NZQ7:0.302
JQT
HOH
8.552
2.856
O
NE
C24
O
ARG C:96 C:113 62.0 0.276 E -129.8 129.7 NA NA NA
ARG D:96 D:113 9.0 NA E -127.9 130.5 NA NA NA
6rpg 1 Q9NZQ7 100.0 4e-83 X-RAY
2019-07-24 ARG A:96 A:113 39.0 0.173 E -115.1 135.4 18.0 0.08 0.093 B:Q9NZQ7:0.093
KDW
6.490
CG
N7
ARG B:96 B:113 33.0 0.147 E -129.8 127.4 19.0 0.084 0.063 A:Q9NZQ7:0.062
KDW
6.472
CG
N3
6ycr 1 Q9NZQ7 100.0 4e-83 X-RAY
2021-02-03 ARG A:96 A:113 93.0 0.413 E -120.7 130.4 28.0 0.124 0.289 B:None:0.289
HOH
2.464
NH1
O
7bea 1 Q9NZQ7 100.0 4e-83 X-RAY
2021-06-09 ARG A:96 A:113 96.0 0.427 E -129.8 135.9 19.0 0.084 0.343 B:Q9NZQ7:0.342
TK2
HOH
6.717
2.701
NH1
NH1
C13
O
ARG B:96 B:113 56.0 0.249 E -127.3 130.3 16.0 0.071 0.178 A:Q9NZQ7:0.178
TK2
HOH
8.554
3.212
O
CD
C20
O
7nld 1 Q9NZQ7 100.0 4e-83 X-RAY
2021-08-11 ARG A:96 C:113 73.0 0.324 E -116.8 131.6 31.0 0.138 0.186 D:Q9NZQ7:0.187
UGZ
HOH
8.243
5.668
O
NH1
O3
O
ARG B:96 A:113 64.0 0.284 E -123.7 116.5 NA NA NA
ARG C:96 B:113 62.0 0.276 E -129.5 116.6 NA NA NA
ARG D:96 D:113 65.0 0.289 E -132.4 111.6 33.0 0.147 0.142 A:Q9NZQ7:0.142
UGZ
HOH
8.093
9.141
O
NH2
C13
O
ARG E:96 E:113 71.0 0.316 E -126.4 123.8 NA NA NA
ARG F:96 F:113 84.0 0.373 E -112.7 127.3 NA NA NA
5ggt 1 Q9NZQ7 100.0 4e-83 X-RAY
2016-11-09 ARG A:96 A:113 80.0 0.356 E -116.1 144.2 57.0 0.253 0.103 B:None:0.102
5n2f 1 Q9NZQ7 100.0 4e-83 X-RAY
2017-06-28 ARG A:96 A:113 77.0 0.342 E -129.7 129.8 16.0 0.071 0.271 B:Q9NZQ7:0.271
8HW
HOH
7.784
2.467
NH2
NE
C6
O
7dy7 1 Q9NZQ7 100.0 4e-83 X-RAY
2022-01-26 ARG A:96 B:113 58.0 0.258 E -133.3 128.6 13.0 0.058 0.2 B:Q9NZQ7:0.2
HOU
8.234
CB
H34
ARG B:96 A:113 77.0 0.342 E -130.0 124.1 12.0 0.053 0.289 A:Q9NZQ7:0.289
HOU
6.240
NH2
H51
5x8l 1 Q9NZQ7 98.31 2e-82 X-RAY
2017-08-16 ARG A:96 A:113 56.0 0.249 E -111.3 111.9 0.0 0.0 0.249 C:None:0.249
ARG D:96 B:113 71.0 0.316 E -119.7 126.6 NA NA NA
ARG G:96 C:113 60.0 0.267 E -125.9 114.4 NA NA NA
ARG J:96 D:113 63.0 0.28 E -128.3 113.4 NA NA NA
ARG M:96 E:113 66.0 0.293 E -123.9 115.3 NA NA NA
5x8m 1 Q9NZQ7 98.31 2e-82 X-RAY
2017-08-16 ARG A:96 A:113 65.0 0.289 E -123.4 134.6 1.0 0.004 0.285 B:None:0.284
HOH
6.210
NE
O
5c3t 1 Q9NZQ7 99.15 2e-82 X-RAY
2015-11-04 ARG A:96 A:113 78.0 0.347 E -118.4 132.8 78.0 0.347 0.0 HOH
2.601
NH1
O
6nm7 1 Q9NZQ7 99.15 2e-82 X-RAY
2019-02-20 ARG A:97 A:113 59.0 0.262 E -124.3 130.5 16.0 0.071 0.191 B:Q9NZQ7:0.191
22L
HOH
8.569
3.299
O
CD
C10
O
ARG B:97 B:113 91.0 0.404 E -139.3 125.3 24.0 0.107 0.297 A:Q9NZQ7:0.298
22L
HOH
7.257
2.837
NH2
NH2
O13
O
6nm8 1 Q9NZQ7 99.15 2e-82 X-RAY
2019-02-20 ARG A:97 A:113 52.0 0.231 E -130.7 127.7 9.0 0.04 0.191 B:Q9NZQ7:0.191
KSD
8.624
O
C5
ARG B:97 B:113 90.0 0.4 E -133.0 126.3 16.0 0.071 0.329 A:Q9NZQ7:0.329
KSD
7.681
CD
C13
6nnv 1 Q9NZQ7 99.15 2e-82 X-RAY
2019-02-20 ARG A:96 A:113 42.0 NA E -117.4 131.7 17.0 NA NA F:None:NA
HOH
2.824
NH1
O
ARG B:96 B:113 44.0 0.196 E -113.8 125.0 NA NA NA
ARG C:96 C:113 53.0 0.236 E -106.1 129.1 NA NA NA
ARG D:96 D:113 47.0 0.209 E -121.5 125.0 NA NA NA
6np9 1 Q9NZQ7 99.15 2e-82 X-RAY
2019-02-20 ARG A:96 A:113 81.0 0.36 E -122.4 128.1 48.0 0.213 0.147 A:Q9NZQ7:0.147
SO4
HOH
2.991
3.107
NH1
NE
O4
O
6noj 1 Q9NZQ7 99.15 2e-82 X-RAY
2019-02-20 ARG A:96 A:113 87.0 0.387 E -127.0 129.0 16.0 0.071 0.316 B:Q9NZQ7:0.316
KW7
HOH
7.730
2.794
NH1
NE
N09
O
ARG B:96 B:113 74.0 0.329 E -126.8 129.5 12.0 0.053 0.276 A:Q9NZQ7:0.276
KW7
HOH
7.862
3.511
NH2
NH1
C13
O
6nos 1 Q9NZQ7 99.15 2e-82 X-RAY
2019-02-20 ARG A:96 A:113 86.0 0.382 E -122.2 123.9 22.0 0.098 0.284 B:Q9NZQ7:0.284
KWA
8.187
NH2
C16
ARG B:96 B:113 67.0 0.298 E -124.8 123.4 16.0 0.071 0.227 A:Q9NZQ7:0.227
KWA
7.520
NH1
CL3
7czd 2 Q9NZQ7 100.0 2e-82 X-RAY
2021-07-14 ARG B:96 B:113 70.0 0.311 E -126.7 138.6 24.0 0.107 0.204 A:None:0.204
HOH
3.084
NH2
O
ARG D:96 D:113 67.0 0.298 E -123.4 138.6 NA NA NA
5o4y 1 Q9NZQ7 99.15 3e-82 X-RAY
2017-09-20 ARG A:96 B:113 110.0 0.489 E -111.8 130.2 61.0 0.271 0.218 E:None:0.218
HOH
2.305
HH21
O
ARG B:96 C:113 132.0 0.587 E -110.2 127.2 NA NA NA
ARG C:96 E:113 90.0 0.4 E -128.7 121.3 NA NA NA
5xxy 3 Q9NZQ7 100.0 5e-82 X-RAY
2017-09-20 ARG C:96 A:113 64.0 0.284 E -137.2 122.4 0.0 0.0 0.284 A:None:0.284
5jds 2 Q9NZQ7 100.0 4e-81 X-RAY
2017-04-12 ARG B:97 A:113 68.0 0.302 E -135.9 137.1 7.0 0.031 0.271 A:None:0.271
SO4
HOH
6.432
3.461
NH1
CB
O2
O
4zqk 1 Q9NZQ7 100.0 4e-81 X-RAY
2015-11-04 ARG A:96 A:113 99.0 0.44 E -124.4 135.4 40.0 0.178 0.262 B:Q15116:0.262
HOH
5.107
NH1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9nzq7-f1 1 Q9NZQ7 100.0 0.0 ARG A:113 A:113 97.0 0.431 E -119.5 128.9