Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr9 | 5457364 | . | G | A | CCDS6464.1:NM_014143.3:c.338cGc>cAc_NP_054862.1:p.113R>H | Homo sapiens CD274 molecule (CD274), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5ius | 2 | Q9NZQ7 | 100.0 | 5e-168 |
X-RAY |
2016-09-28 | ARG | C:97 | C:113 | 102.0 | 0.453 | E | -138.9 | 128.7 | 44.0 | 0.196 | 0.257 |
A:Q15116:0.258 |
HOH |
4.241 |
NH1 |
O |
|
ARG | D:97 | D:113 | 96.0 | 0.427 | E | -139.4 | 124.9 | NA | NA | NA | |||||||||||||
3bik | 1 | Q9NZQ7 | 100.0 | 7e-168 |
X-RAY |
2008-02-26 | ARG | A:96 | A:113 | 73.0 | 0.324 | E | -129.9 | 134.6 | 47.0 | 0.209 | 0.115 |
B:Q02242:0.116 |
HOH |
3.621 |
NH1 |
O |
|
3bis | 1 | Q9NZQ7 | 100.0 | 7e-168 |
X-RAY |
2008-02-26 | ARG | A:96 | A:113 | 61.0 | 0.271 | E | -135.0 | 135.6 | 61.0 | 0.271 | 0.0 |
HOH |
4.916 |
CB |
O |
||
ARG | B:96 | B:113 | 58.0 | 0.258 | E | -137.5 | 142.2 | NA | NA | NA | |||||||||||||
5jdr | 1 | Q9NZQ7 | 100.0 | 7e-168 |
X-RAY |
2017-04-12 | ARG | A:97 | A:113 | 88.0 | 0.391 | E | -102.7 | 135.7 | 88.0 | 0.391 | 0.0 | ||||||
ARG | B:97 | B:113 | 79.0 | 0.351 | E | -91.6 | 127.3 | 79.0 | 0.351 | 0.0 | |||||||||||||
5grj | 3 | Q9NZQ7 | 100.0 | 3e-167 |
X-RAY |
2016-11-02 | ARG | C:96 | A:113 | 72.0 | 0.32 | E | -157.4 | 146.0 | 15.0 | 0.067 | 0.253 |
B:None:0.12 A:None:0.138 |
|||||
3sbw | 2 | Q9NZQ7 | 100.0 | 4e-167 |
X-RAY |
2011-07-13 | ARG | C:96 | C:113 | 98.0 | 0.436 | E | -117.6 | 136.5 | 35.0 | 0.156 | 0.28 |
B:Q02242:0.28 |
HOH |
5.492 |
NH2 |
O |
|
4z18 | 1 | Q9NZQ7 | 100.0 | 4e-167 |
X-RAY |
2015-04-15 | ARG | A:96 | A:113 | 76.0 | 0.338 | E | -123.5 | 130.3 | 76.0 | 0.338 | 0.0 |
HOH |
3.220 |
NH2 |
O |
||
ARG | B:96 | B:113 | 64.0 | 0.284 | E | -145.8 | 132.7 | 64.0 | 0.284 | 0.0 |
HOH |
3.316 |
NH1 |
O |
|||||||||
6pv9 | 1 | Q9NZQ7 | 100.0 | 4e-167 |
X-RAY |
2020-01-01 | ARG | A:96 | A:113 | 94.0 | 0.418 | E | -120.1 | 121.9 | 48.0 | 0.213 | 0.205 |
B:None:0.204 |
HOH |
3.336 |
NE |
O |
|
3fn3 | 1 | Q9NZQ7 | 100.0 | 2e-166 |
X-RAY |
2009-12-29 | ARG | A:96 | A:113 | 57.0 | 0.253 | E | -94.0 | 130.2 | 57.0 | 0.253 | 0.0 | ||||||
ARG | B:96 | B:113 | 48.0 | 0.213 | E | -114.2 | 138.3 | 48.0 | 0.213 | 0.0 | |||||||||||||
5xj4 | 1 | Q9NZQ7 | 100.0 | 2e-166 |
X-RAY |
2018-04-25 | ARG | A:96 | A:113 | 66.0 | 0.293 | E | -116.2 | 130.9 | 66.0 | 0.293 | 0.0 |
HOH |
5.967 |
N |
O |
||
7c88 | 3 | Q9NZQ7 | 100.0 | 2e-99 |
X-RAY |
2021-04-14 | ARG | C:113 | M:113 | 46.0 | 0.204 | E | -145.2 | 133.5 | 15.0 | 0.067 | 0.137 |
A:None:0.138 |
HOH |
3.206 |
NH2 |
O |
|
ARG | F:113 | C:113 | 59.0 | 0.262 | E | -137.2 | 137.0 | NA | NA | NA | |||||||||||||
5j89 | 1 | Q9NZQ7 | 100.0 | 6e-97 |
X-RAY |
2016-04-27 | ARG | A:112 | C:113 | 84.0 | 0.373 | E | -127.8 | 133.6 | 13.0 | 0.058 | 0.315 |
C:Q9NZQ7:0.316 |
6GX HOH |
7.784 2.421 |
NH1 NH1 |
C O |
|
ARG | B:112 | A:113 | 81.0 | 0.36 | E | -123.6 | 137.5 | NA | NA | NA | |||||||||||||
ARG | C:112 | D:113 | 55.0 | 0.244 | E | -132.5 | 133.1 | 19.0 | 0.084 | 0.16 |
A:Q9NZQ7:0.16 |
6GX HOH |
8.701 3.423 |
O CD |
C15 O |
||||||||
ARG | D:112 | B:113 | 61.0 | 0.271 | E | -125.3 | 132.4 | NA | NA | NA | |||||||||||||
5n2d | 1 | Q9NZQ7 | 100.0 | 6e-97 |
X-RAY |
2017-06-28 | ARG | A:112 | A:113 | 88.0 | 0.391 | E | -126.3 | 129.6 | 12.0 | 0.053 | 0.338 |
B:Q9NZQ7:0.338 |
8J8 HOH |
7.442 2.507 |
NH1 NH1 |
C25 O |
|
ARG | B:112 | B:113 | 56.0 | 0.249 | E | -141.4 | 129.2 | 22.0 | 0.098 | 0.151 |
A:Q9NZQ7:0.151 |
8J8 HOH |
8.519 3.538 |
O CD |
C11 O |
||||||||
ARG | C:112 | C:113 | 45.0 | 0.2 | E | -127.6 | 132.5 | 11.0 | 0.049 | 0.151 |
D:Q9NZQ7:0.151 |
8J8 HOH |
8.591 2.741 |
CB NE |
C O |
||||||||
ARG | D:112 | D:113 | 56.0 | 0.249 | E | -129.3 | 126.3 | 14.0 | 0.062 | 0.187 |
C:Q9NZQ7:0.187 |
8J8 HOH |
8.622 2.914 |
O NE |
C11 O |
||||||||
5o45 | 1 | Q9NZQ7 | 100.0 | 5e-84 |
X-RAY |
2017-09-20 | ARG | A:97 | A:113 | 53.0 | 0.236 | E | -118.1 | 132.7 | 26.0 | 0.116 | 0.12 |
B:None:0.12 |
HOH |
2.069 |
HH12 |
O |
|
7oun | 1 | Q9NZQ7 | 100.0 | 5e-84 |
X-RAY |
2021-09-15 | ARG | A:97 | A:113 | 73.0 | 0.324 | E | -124.4 | 132.9 | 26.0 | 0.116 | 0.208 |
B:None:0.209 |
HOH |
4.061 |
NH2 |
O |
|
5j8o | 1 | Q9NZQ7 | 100.0 | 4e-83 |
X-RAY |
2016-04-27 | ARG | A:96 | A:113 | 57.0 | 0.253 | E | -135.9 | 131.4 | 15.0 | 0.067 | 0.186 |
B:Q9NZQ7:0.187 |
6GZ HOH |
8.744 6.553 |
O NH2 |
C17 O |
|
ARG | B:96 | B:113 | 82.0 | 0.364 | E | -130.2 | 131.1 | 11.0 | 0.049 | 0.315 |
A:Q9NZQ7:0.316 |
6GZ HOH |
7.928 4.187 |
NH1 NH2 |
C O |
||||||||
5n2f | 2 | Q9NZQ7 | 100.0 | 4e-83 |
X-RAY |
2017-06-28 | ARG | B:96 | B:113 | 65.0 | 0.289 | E | -128.4 | 130.6 | 25.0 | 0.111 | 0.178 |
A:Q9NZQ7:0.178 |
HOH |
9.113 |
O |
O |
|
6vqn | 1 | Q9NZQ7 | 100.0 | 4e-83 |
X-RAY |
2021-01-20 | ARG | A:97 | A:113 | 56.0 | 0.249 | E | -126.6 | 132.2 | 28.0 | 0.124 | 0.125 |
B:Q9NZQ7:0.124 |
R81 HOH |
8.311 2.947 |
CD NH2 |
C18 O |
|
ARG | B:97 | B:113 | 52.0 | 0.231 | E | -135.4 | 128.0 | 27.0 | 0.12 | 0.111 |
A:Q9NZQ7:0.111 |
R81 HOH |
8.154 3.321 |
CD NE |
C6 O |
||||||||
ARG | C:97 | C:113 | 59.0 | 0.262 | E | -133.3 | 135.2 | NA | NA | NA | |||||||||||||
5niu | 1 | Q9NZQ7 | 100.0 | 4e-83 |
X-RAY |
2017-12-06 | ARG | A:96 | A:113 | 61.0 | 0.271 | E | -125.9 | 136.7 | 25.0 | 0.111 | 0.16 |
B:Q9NZQ7:0.16 |
8YZ HOH |
7.573 3.169 |
NE NH2 |
C11 O |
|
ARG | B:96 | B:113 | 77.0 | 0.342 | E | -129.2 | 135.4 | 14.0 | 0.062 | 0.28 |
A:Q9NZQ7:0.28 |
8YZ EDO HOH |
7.757 7.773 2.315 |
NH2 NH2 NH1 |
C22 C2 O |
||||||||
ARG | C:96 | C:113 | 60.0 | 0.267 | E | -128.4 | 135.9 | NA | NA | NA | |||||||||||||
ARG | D:96 | D:113 | 76.0 | 0.338 | E | -127.3 | 134.2 | NA | NA | NA | |||||||||||||
6r3k | 1 | Q9NZQ7 | 100.0 | 4e-83 |
X-RAY |
2019-04-03 | ARG | A:96 | A:113 | 69.0 | 0.307 | E | -123.6 | 128.9 | 42.0 | 0.187 | 0.12 |
B:Q9NZQ7:0.12 |
JQT HOH |
6.353 2.877 |
CG NH2 |
N01 O |
|
ARG | B:96 | B:113 | 82.0 | 0.364 | E | -127.5 | 130.2 | 14.0 | 0.062 | 0.302 |
A:Q9NZQ7:0.302 |
JQT HOH |
8.552 2.856 |
O NE |
C24 O |
||||||||
ARG | C:96 | C:113 | 62.0 | 0.276 | E | -129.8 | 129.7 | NA | NA | NA | |||||||||||||
ARG | D:96 | D:113 | 9.0 | NA | E | -127.9 | 130.5 | NA | NA | NA | |||||||||||||
6rpg | 1 | Q9NZQ7 | 100.0 | 4e-83 |
X-RAY |
2019-07-24 | ARG | A:96 | A:113 | 39.0 | 0.173 | E | -115.1 | 135.4 | 18.0 | 0.08 | 0.093 |
B:Q9NZQ7:0.093 |
KDW |
6.490 |
CG |
N7 |
|
ARG | B:96 | B:113 | 33.0 | 0.147 | E | -129.8 | 127.4 | 19.0 | 0.084 | 0.063 |
A:Q9NZQ7:0.062 |
KDW |
6.472 |
CG |
N3 |
||||||||
6ycr | 1 | Q9NZQ7 | 100.0 | 4e-83 |
X-RAY |
2021-02-03 | ARG | A:96 | A:113 | 93.0 | 0.413 | E | -120.7 | 130.4 | 28.0 | 0.124 | 0.289 |
B:None:0.289 |
HOH |
2.464 |
NH1 |
O |
|
7bea | 1 | Q9NZQ7 | 100.0 | 4e-83 |
X-RAY |
2021-06-09 | ARG | A:96 | A:113 | 96.0 | 0.427 | E | -129.8 | 135.9 | 19.0 | 0.084 | 0.343 |
B:Q9NZQ7:0.342 |
TK2 HOH |
6.717 2.701 |
NH1 NH1 |
C13 O |
|
ARG | B:96 | B:113 | 56.0 | 0.249 | E | -127.3 | 130.3 | 16.0 | 0.071 | 0.178 |
A:Q9NZQ7:0.178 |
TK2 HOH |
8.554 3.212 |
O CD |
C20 O |
||||||||
7nld | 1 | Q9NZQ7 | 100.0 | 4e-83 |
X-RAY |
2021-08-11 | ARG | A:96 | C:113 | 73.0 | 0.324 | E | -116.8 | 131.6 | 31.0 | 0.138 | 0.186 |
D:Q9NZQ7:0.187 |
UGZ HOH |
8.243 5.668 |
O NH1 |
O3 O |
|
ARG | B:96 | A:113 | 64.0 | 0.284 | E | -123.7 | 116.5 | NA | NA | NA | |||||||||||||
ARG | C:96 | B:113 | 62.0 | 0.276 | E | -129.5 | 116.6 | NA | NA | NA | |||||||||||||
ARG | D:96 | D:113 | 65.0 | 0.289 | E | -132.4 | 111.6 | 33.0 | 0.147 | 0.142 |
A:Q9NZQ7:0.142 |
UGZ HOH |
8.093 9.141 |
O NH2 |
C13 O |
||||||||
ARG | E:96 | E:113 | 71.0 | 0.316 | E | -126.4 | 123.8 | NA | NA | NA | |||||||||||||
ARG | F:96 | F:113 | 84.0 | 0.373 | E | -112.7 | 127.3 | NA | NA | NA | |||||||||||||
5ggt | 1 | Q9NZQ7 | 100.0 | 4e-83 |
X-RAY |
2016-11-09 | ARG | A:96 | A:113 | 80.0 | 0.356 | E | -116.1 | 144.2 | 57.0 | 0.253 | 0.103 |
B:None:0.102 |
|||||
5n2f | 1 | Q9NZQ7 | 100.0 | 4e-83 |
X-RAY |
2017-06-28 | ARG | A:96 | A:113 | 77.0 | 0.342 | E | -129.7 | 129.8 | 16.0 | 0.071 | 0.271 |
B:Q9NZQ7:0.271 |
8HW HOH |
7.784 2.467 |
NH2 NE |
C6 O |
|
7dy7 | 1 | Q9NZQ7 | 100.0 | 4e-83 |
X-RAY |
2022-01-26 | ARG | A:96 | B:113 | 58.0 | 0.258 | E | -133.3 | 128.6 | 13.0 | 0.058 | 0.2 |
B:Q9NZQ7:0.2 |
HOU |
8.234 |
CB |
H34 |
|
ARG | B:96 | A:113 | 77.0 | 0.342 | E | -130.0 | 124.1 | 12.0 | 0.053 | 0.289 |
A:Q9NZQ7:0.289 |
HOU |
6.240 |
NH2 |
H51 |
||||||||
5x8l | 1 | Q9NZQ7 | 98.31 | 2e-82 |
X-RAY |
2017-08-16 | ARG | A:96 | A:113 | 56.0 | 0.249 | E | -111.3 | 111.9 | 0.0 | 0.0 | 0.249 |
C:None:0.249 |
|||||
ARG | D:96 | B:113 | 71.0 | 0.316 | E | -119.7 | 126.6 | NA | NA | NA | |||||||||||||
ARG | G:96 | C:113 | 60.0 | 0.267 | E | -125.9 | 114.4 | NA | NA | NA | |||||||||||||
ARG | J:96 | D:113 | 63.0 | 0.28 | E | -128.3 | 113.4 | NA | NA | NA | |||||||||||||
ARG | M:96 | E:113 | 66.0 | 0.293 | E | -123.9 | 115.3 | NA | NA | NA | |||||||||||||
5x8m | 1 | Q9NZQ7 | 98.31 | 2e-82 |
X-RAY |
2017-08-16 | ARG | A:96 | A:113 | 65.0 | 0.289 | E | -123.4 | 134.6 | 1.0 | 0.004 | 0.285 |
B:None:0.284 |
HOH |
6.210 |
NE |
O |
|
5c3t | 1 | Q9NZQ7 | 99.15 | 2e-82 |
X-RAY |
2015-11-04 | ARG | A:96 | A:113 | 78.0 | 0.347 | E | -118.4 | 132.8 | 78.0 | 0.347 | 0.0 |
HOH |
2.601 |
NH1 |
O |
||
6nm7 | 1 | Q9NZQ7 | 99.15 | 2e-82 |
X-RAY |
2019-02-20 | ARG | A:97 | A:113 | 59.0 | 0.262 | E | -124.3 | 130.5 | 16.0 | 0.071 | 0.191 |
B:Q9NZQ7:0.191 |
22L HOH |
8.569 3.299 |
O CD |
C10 O |
|
ARG | B:97 | B:113 | 91.0 | 0.404 | E | -139.3 | 125.3 | 24.0 | 0.107 | 0.297 |
A:Q9NZQ7:0.298 |
22L HOH |
7.257 2.837 |
NH2 NH2 |
O13 O |
||||||||
6nm8 | 1 | Q9NZQ7 | 99.15 | 2e-82 |
X-RAY |
2019-02-20 | ARG | A:97 | A:113 | 52.0 | 0.231 | E | -130.7 | 127.7 | 9.0 | 0.04 | 0.191 |
B:Q9NZQ7:0.191 |
KSD |
8.624 |
O |
C5 |
|
ARG | B:97 | B:113 | 90.0 | 0.4 | E | -133.0 | 126.3 | 16.0 | 0.071 | 0.329 |
A:Q9NZQ7:0.329 |
KSD |
7.681 |
CD |
C13 |
||||||||
6nnv | 1 | Q9NZQ7 | 99.15 | 2e-82 |
X-RAY |
2019-02-20 | ARG | A:96 | A:113 | 42.0 | NA | E | -117.4 | 131.7 | 17.0 | NA | NA |
F:None:NA |
HOH |
2.824 |
NH1 |
O |
|
ARG | B:96 | B:113 | 44.0 | 0.196 | E | -113.8 | 125.0 | NA | NA | NA | |||||||||||||
ARG | C:96 | C:113 | 53.0 | 0.236 | E | -106.1 | 129.1 | NA | NA | NA | |||||||||||||
ARG | D:96 | D:113 | 47.0 | 0.209 | E | -121.5 | 125.0 | NA | NA | NA | |||||||||||||
6np9 | 1 | Q9NZQ7 | 99.15 | 2e-82 |
X-RAY |
2019-02-20 | ARG | A:96 | A:113 | 81.0 | 0.36 | E | -122.4 | 128.1 | 48.0 | 0.213 | 0.147 |
A:Q9NZQ7:0.147 |
SO4 HOH |
2.991 3.107 |
NH1 NE |
O4 O |
|
6noj | 1 | Q9NZQ7 | 99.15 | 2e-82 |
X-RAY |
2019-02-20 | ARG | A:96 | A:113 | 87.0 | 0.387 | E | -127.0 | 129.0 | 16.0 | 0.071 | 0.316 |
B:Q9NZQ7:0.316 |
KW7 HOH |
7.730 2.794 |
NH1 NE |
N09 O |
|
ARG | B:96 | B:113 | 74.0 | 0.329 | E | -126.8 | 129.5 | 12.0 | 0.053 | 0.276 |
A:Q9NZQ7:0.276 |
KW7 HOH |
7.862 3.511 |
NH2 NH1 |
C13 O |
||||||||
6nos | 1 | Q9NZQ7 | 99.15 | 2e-82 |
X-RAY |
2019-02-20 | ARG | A:96 | A:113 | 86.0 | 0.382 | E | -122.2 | 123.9 | 22.0 | 0.098 | 0.284 |
B:Q9NZQ7:0.284 |
KWA |
8.187 |
NH2 |
C16 |
|
ARG | B:96 | B:113 | 67.0 | 0.298 | E | -124.8 | 123.4 | 16.0 | 0.071 | 0.227 |
A:Q9NZQ7:0.227 |
KWA |
7.520 |
NH1 |
CL3 |
||||||||
7czd | 2 | Q9NZQ7 | 100.0 | 2e-82 |
X-RAY |
2021-07-14 | ARG | B:96 | B:113 | 70.0 | 0.311 | E | -126.7 | 138.6 | 24.0 | 0.107 | 0.204 |
A:None:0.204 |
HOH |
3.084 |
NH2 |
O |
|
ARG | D:96 | D:113 | 67.0 | 0.298 | E | -123.4 | 138.6 | NA | NA | NA | |||||||||||||
5o4y | 1 | Q9NZQ7 | 99.15 | 3e-82 |
X-RAY |
2017-09-20 | ARG | A:96 | B:113 | 110.0 | 0.489 | E | -111.8 | 130.2 | 61.0 | 0.271 | 0.218 |
E:None:0.218 |
HOH |
2.305 |
HH21 |
O |
|
ARG | B:96 | C:113 | 132.0 | 0.587 | E | -110.2 | 127.2 | NA | NA | NA | |||||||||||||
ARG | C:96 | E:113 | 90.0 | 0.4 | E | -128.7 | 121.3 | NA | NA | NA | |||||||||||||
5xxy | 3 | Q9NZQ7 | 100.0 | 5e-82 |
X-RAY |
2017-09-20 | ARG | C:96 | A:113 | 64.0 | 0.284 | E | -137.2 | 122.4 | 0.0 | 0.0 | 0.284 |
A:None:0.284 |
|||||
5jds | 2 | Q9NZQ7 | 100.0 | 4e-81 |
X-RAY |
2017-04-12 | ARG | B:97 | A:113 | 68.0 | 0.302 | E | -135.9 | 137.1 | 7.0 | 0.031 | 0.271 |
A:None:0.271 |
SO4 HOH |
6.432 3.461 |
NH1 CB |
O2 O |
|
4zqk | 1 | Q9NZQ7 | 100.0 | 4e-81 |
X-RAY |
2015-11-04 | ARG | A:96 | A:113 | 99.0 | 0.44 | E | -124.4 | 135.4 | 40.0 | 0.178 | 0.262 |
B:Q15116:0.262 |
HOH |
5.107 |
NH1 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9nzq7-f1 | 1 | Q9NZQ7 | 100.0 | 0.0 | ARG | A:113 | A:113 | 97.0 | 0.431 | E | -119.5 | 128.9 |