Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79117556 . C A CCDS6653.1:NM_001097633.1:c.259Cgg>Agg_NP_001091102.1:p.87R>R Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ARG A:50 A:87 85.0 0.378 -116.9 151.1 85.0 0.378 0.0 NAG
HOH
 9.576
2.904
 O
N
 O6
O
ARG B:50 B:87 83.0 0.369 -172.7 129.6 83.0 0.369 0.0 HOH
 2.861
 NH2
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ARG A:50 A:87 126.0 0.56 -132.5 101.2 126.0 0.56 0.0 HOH
 5.277
 NH2
 O
ARG B:50 B:87 73.0 0.324 -123.7 134.7 73.0 0.324 0.0 HOH
 3.422
 NH1
 O
ARG C:50 C:87 89.0 0.396 -103.3 121.0 NA NA NA
ARG D:50 D:87 149.0 0.662 157.9 128.4 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 ARG A:50 A:87 83.0 0.369 -110.9 146.2 83.0 0.369 0.0 FUC
HOH
 6.753
3.408
 O
NE
 O4
O
ARG B:50 B:87 128.0 0.569 -157.2 147.8 NA NA NA
ARG C:50 C:87 116.0 0.516 -132.9 145.9 NA NA NA
ARG D:50 D:87 134.0 0.596 -79.4 146.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 ARG A:87 A:87 134.0 0.596 -116.9 141.4