Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79117617 . G A CCDS6653.1:NM_001097633.1:c.320cGc>cAc_NP_001091102.1:p.107R>H Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ARG A:70 A:107 35.0 0.156 H -80.4 -9.9 35.0 0.156 0.0 HOH
 3.583
 NH1
 O
ARG B:70 B:107 36.0 0.16 H -79.7 -15.9 36.0 0.16 0.0 HOH
 3.664
 NH2
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ARG A:70 A:107 33.0 0.147 H -63.2 -5.6 33.0 0.147 0.0 HOH
 6.385
 NH2
 O
ARG B:70 B:107 39.0 0.173 T -77.9 6.0 39.0 0.173 0.0 HOH
 6.628
 O
 O
ARG C:70 C:107 36.0 0.16 T -77.0 -1.4 NA NA NA
ARG D:70 D:107 39.0 0.173 I -69.1 -21.2 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 ARG A:70 A:107 26.0 0.116 H -80.1 -6.6 26.0 0.116 0.0 FUC
HOH
 8.780
4.494
 CD
NH1
 C6
O
ARG B:70 B:107 31.0 0.138 H -79.3 -12.8 NA NA NA
ARG C:70 C:107 33.0 0.147 H -89.6 -9.1 NA NA NA
ARG D:70 D:107 32.0 0.142 H -80.8 -22.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 ARG A:107 A:107 15.0 0.067 H -76.6 -12.6