Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79117653 . C A CCDS6653.1:NM_001097633.1:c.356gCg>gAg_NP_001091102.1:p.119A>E Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 VAL A:82 A:119 71.0 0.458 H -60.4 -38.1 71.0 0.458 0.0 HOH
 2.672
 O
 O
VAL B:82 B:119 73.0 0.471 H -62.3 -35.9 73.0 0.471 0.0 HOH
 2.804
 O
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 VAL A:82 A:119 70.0 0.452 H -55.2 -34.3 70.0 0.452 0.0
VAL B:82 B:119 67.0 0.432 H -63.5 -29.1 67.0 0.432 0.0
VAL C:82 C:119 65.0 0.419 H -54.5 -39.4 NA NA NA
VAL D:82 D:119 64.0 0.413 T -70.7 -20.5 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 VAL A:82 A:119 70.0 0.452 H -50.9 -41.8 70.0 0.452 0.0 HTO
HOH
 7.131
2.805
 N
O
 O2
O
VAL B:82 B:119 71.0 0.458 H -64.0 -33.2 NA NA NA
VAL C:82 C:119 75.0 0.484 H -51.8 -37.7 NA NA NA
VAL D:82 D:119 70.0 0.452 H -59.5 -30.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 ALA A:119 A:119 37.0 0.322 H -60.1 -37.2