Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79117730 . A C CCDS6653.1:NM_001097633.1:c.433Atg>Ctg_NP_001091102.1:p.145M>L Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 MET A:108 A:145 11.0 0.059 -149.6 141.3 11.0 0.059 0.0 HOH
 3.070
 SD
 O
MET B:108 B:145 15.0 0.081 -147.1 145.4 15.0 0.081 0.0 HOH
 2.949
 SD
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 MET A:108 A:145 4.0 0.022 -151.3 127.5 4.0 0.022 0.0 HOH
 5.066
 N
 O
MET B:108 B:145 5.0 0.027 -153.1 142.9 5.0 0.027 0.0 HOH
 4.375
 SD
 O
MET C:108 C:145 12.0 0.065 -143.1 140.3 NA NA NA
MET D:108 D:145 11.0 0.059 -162.7 118.4 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 MET A:108 A:145 8.0 0.043 -135.8 146.5 8.0 0.043 0.0 HOH
 3.158
 CE
 O
MET B:108 B:145 13.0 0.07 -143.0 141.4 NA NA NA
MET C:108 C:145 9.0 0.049 -134.9 148.4 NA NA NA
MET D:108 D:145 12.0 0.065 -142.2 148.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 MET A:145 A:145 6.0 0.032 -147.1 142.8