Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79117751 . A C CCDS6653.1:NM_001097633.1:c.454Att>Ctt_NP_001091102.1:p.152I>L Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ILE A:115 A:152 1.0 0.006 E -108.1 123.2 1.0 0.006 0.0 HOH
 6.614
 O
 O
ILE B:115 B:152 1.0 0.006 E -110.8 119.4 1.0 0.006 0.0 HOH
 6.878
 C
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ILE A:115 A:152 1.0 0.006 E -103.3 134.7 1.0 0.006 0.0 HOH
 7.078
 O
 O
ILE B:115 B:152 2.0 0.011 E -90.7 133.7 2.0 0.011 0.0 HOH
 7.102
 C
 O
ILE C:115 C:152 2.0 0.011 E -96.0 123.9 NA NA NA
ILE D:115 D:152 2.0 0.011 E -100.6 127.1 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 ILE A:115 A:152 3.0 0.017 E -107.8 121.7 3.0 0.017 0.0 NA
UDP
HOH
 8.459
9.152
7.198
 CD1
CG2
O
 NA
O2'
O
ILE B:115 B:152 0.0 0.0 E -106.3 118.3 NA NA NA
ILE C:115 C:152 1.0 0.006 E -108.2 121.0 NA NA NA
ILE D:115 D:152 1.0 0.006 E -109.7 115.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 ILE A:152 A:152 0.0 0.0 E -107.8 116.8