Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79117770 . C A CCDS6653.1:NM_001097633.1:c.473tCc>tAc_NP_001091102.1:p.158S>Y Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ALA A:121 A:158 17.0 0.148 S -73.3 149.7 17.0 0.148 0.0 HOH
 2.600
 O
 O
ALA B:121 B:158 20.0 0.174 S -65.0 155.7 20.0 0.174 0.0 HOH
 3.775
 CA
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ALA A:121 A:158 21.0 0.183 S -80.3 154.0 21.0 0.183 0.0 HOH
 2.558
 O
 O
ALA B:121 B:158 23.0 0.2 S -61.2 169.3 23.0 0.2 0.0 HOH
 3.481
 CB
 O
ALA C:121 C:158 24.0 0.209 S -67.1 166.7 NA NA NA
ALA D:121 D:158 15.0 0.13 S -77.2 148.8 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 ALA A:121 A:158 20.0 0.174 S -64.0 163.8 20.0 0.174 0.0 UDP
HOH
 7.041
3.916
 N
CB
 N3
O
ALA B:121 B:158 22.0 0.191 S -76.8 164.3 NA NA NA
ALA C:121 C:158 20.0 0.174 S -68.2 159.2 NA NA NA
ALA D:121 D:158 23.0 0.2 S -58.5 161.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 SER A:158 A:158 18.0 0.157 S -65.9 157.1