Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79117787 . G A CCDS6653.1:NM_001097633.1:c.490Gct>Act_NP_001091102.1:p.164A>T Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ALA A:127 A:164 36.0 0.313 H -58.2 -45.7 36.0 0.313 0.0 HOH
 6.941
 N
 O
ALA B:127 B:164 44.0 0.383 H -60.0 -40.5 44.0 0.383 0.0 HOH
 7.724
 N
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ALA A:127 A:164 26.0 0.226 H -57.6 -44.7 26.0 0.226 0.0 HOH
 6.960
 N
 O
ALA B:127 B:164 42.0 0.365 H -57.2 -31.5 42.0 0.365 0.0 HOH
 6.171
 O
 O
ALA C:127 C:164 44.0 0.383 H -55.0 -38.6 NA NA NA
ALA D:127 D:164 38.0 0.33 H -75.3 -42.9 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 ALA A:127 A:164 34.0 0.296 H -53.6 -35.9 34.0 0.296 0.0 HOH
 3.806
 N
 O
ALA B:127 B:164 36.0 0.313 H -54.7 -39.2 NA NA NA
ALA C:127 C:164 35.0 0.304 H -58.6 -34.3 NA NA NA
ALA D:127 D:164 42.0 0.365 H -56.8 -38.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 ALA A:164 A:164 41.0 0.357 H -60.6 -40.4