Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79117802 . A C CCDS6653.1:NM_001097633.1:c.505Atc>Ctc_NP_001091102.1:p.169I>L Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ILE A:132 A:169 2.0 0.011 H -57.6 -45.3 2.0 0.011 0.0 HOH
 5.834
 C
 O
ILE B:132 B:169 4.0 0.023 H -66.0 -49.7 4.0 0.023 0.0 HOH
 6.227
 N
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ILE A:132 A:169 1.0 0.006 H -58.0 -54.7 1.0 0.006 0.0 HOH
 6.165
 O
 O
ILE B:132 B:169 3.0 0.017 H -82.1 -38.0 3.0 0.017 0.0 HOH
 6.666
 N
 O
ILE C:132 C:169 4.0 0.023 H -70.9 -47.0 NA NA NA
ILE D:132 D:169 1.0 0.006 H -54.0 -56.1 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 ILE A:132 A:169 4.0 0.023 H -59.0 -43.6 4.0 0.023 0.0 NA
HOH
 5.999
5.766
 O
N
 NA
O
ILE B:132 B:169 2.0 0.011 H -57.0 -51.1 NA NA NA
ILE C:132 C:169 3.0 0.017 H -64.5 -44.7 NA NA NA
ILE D:132 D:169 1.0 0.006 H -61.6 -49.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 ILE A:169 A:169 0.0 0.0 H -59.7 -50.5