Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79117805 . G A CCDS6653.1:NM_001097633.1:c.508Gct>Act_NP_001091102.1:p.170A>T Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ALA A:133 A:170 6.0 0.052 H -62.9 -38.4 6.0 0.052 0.0 HOH
 3.012
 O
 O
ALA B:133 B:170 2.0 0.017 H -57.5 -41.0 2.0 0.017 0.0 HOH
 3.859
 C
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ALA A:133 A:170 9.0 0.078 H -45.6 -31.4 9.0 0.078 0.0 HOH
 2.655
 O
 O
ALA B:133 B:170 2.0 0.017 H -69.2 -38.9 2.0 0.017 0.0 HOH
 8.896
 N
 O
ALA C:133 C:170 2.0 0.017 H -60.3 -22.9 NA NA NA
ALA D:133 D:170 6.0 0.052 H -48.4 -33.0 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 ALA A:133 A:170 8.0 0.07 H -63.1 -37.1 8.0 0.07 0.0 NA
HOH
 2.416
3.587
 O
O
 NA
O
ALA B:133 B:170 8.0 0.07 H -55.4 -30.9 NA NA NA
ALA C:133 C:170 9.0 0.078 H -61.9 -35.0 NA NA NA
ALA D:133 D:170 10.0 0.087 H -52.5 -30.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 ALA A:170 A:170 6.0 0.052 H -60.3 -41.2