Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79117871 . C A CCDS6653.1:NM_001097633.1:c.574Cgg>Agg_NP_001091102.1:p.192R>R Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ARG A:155 A:192 27.0 0.12 H -68.1 -40.2 27.0 0.12 0.0 HOH
 2.776
 NH2
 O
ARG B:155 B:192 30.0 0.133 H -70.6 -34.7 30.0 0.133 0.0 HOH
 2.707
 NH2
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 ARG A:155 A:192 27.0 0.12 H -69.9 -32.2 27.0 0.12 0.0 NGA
HOH
 9.729
2.741
 CG
NH2
 O6
O
ARG B:155 B:192 31.0 0.138 H -57.8 -40.6 31.0 0.138 0.0 NGA
HOH
 9.705
3.081
 CG
NH2
 O6
O
ARG C:155 C:192 31.0 0.138 H -65.1 -32.4 NA NA NA
ARG D:155 D:192 30.0 0.133 H -57.1 -34.1 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 ARG A:155 A:192 31.0 0.138 H -65.7 -42.9 31.0 0.138 0.0 HTO
UDP
HOH
 3.431
3.532
2.703
 CB
NE
NH2
 O1
C4'
O
ARG B:155 B:192 32.0 0.142 H -63.6 -41.8 NA NA NA
ARG C:155 C:192 31.0 0.138 H -62.8 -43.6 NA NA NA
ARG D:155 D:192 29.0 0.129 H -60.1 -45.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 ARG A:192 A:192 26.0 0.116 H -66.4 -43.1