Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79118081 . G A CCDS6653.1:NM_001097633.1:c.784Gtt>Att_NP_001091102.1:p.262V>I Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 VAL A:225 A:262 67.0 0.432 E -127.3 122.8 67.0 0.432 0.0 HOH
 3.101
 O
 O
VAL B:225 B:262 78.0 0.503 E -115.0 113.7 78.0 0.503 0.0 HOH
 3.661
 C
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 VAL A:225 A:262 65.0 0.419 E -121.7 113.0 65.0 0.419 0.0 HOH
 5.624
 N
 O
VAL B:225 B:262 106.0 0.684 S -91.4 -65.7 106.0 0.684 0.0 HOH
 7.593
 N
 O
VAL C:225 C:262 68.0 0.439 E -124.9 106.4 NA NA NA
VAL D:225 D:262 76.0 0.49 E -122.7 122.3 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 VAL A:225 A:262 74.0 0.477 -117.8 107.0 74.0 0.477 0.0 HOH
 7.738
 N
 O
VAL B:225 B:262 81.0 0.523 E -129.9 115.3 NA NA NA
VAL C:225 C:262 72.0 0.465 S -124.7 106.4 NA NA NA
VAL D:225 D:262 81.0 0.523 -139.0 109.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 VAL A:262 A:262 69.0 0.445 E -117.3 124.6