Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79118165 . G A CCDS6653.1:NM_001097633.1:c.868Gtg>Atg_NP_001091102.1:p.290V>M Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 VAL A:253 A:290 0.0 0.0 E -138.9 104.7 0.0 0.0 0.0 HOH
 4.572
 CG2
 O
VAL B:253 B:290 0.0 0.0 E -138.6 103.4 0.0 0.0 0.0 HOH
 4.699
 CG2
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 VAL A:253 A:290 1.0 0.006 E -138.8 117.3 1.0 0.006 0.0 HOH
 5.212
 CG2
 O
VAL B:253 B:290 0.0 0.0 E -138.0 93.8 0.0 0.0 0.0 HOH
 4.722
 N
 O
VAL C:253 C:290 1.0 0.006 E -145.6 101.4 NA NA NA
VAL D:253 D:290 1.0 0.006 E -131.5 106.5 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 VAL A:253 A:290 0.0 0.0 E -130.5 116.1 0.0 0.0 0.0 HOH
 4.601
 CG2
 O
VAL B:253 B:290 0.0 0.0 E -136.9 111.1 NA NA NA
VAL C:253 C:290 1.0 0.006 E -136.3 111.9 NA NA NA
VAL D:253 D:290 1.0 0.006 E -131.9 108.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 VAL A:290 A:290 0.0 0.0 E -117.9 115.5