Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79118295 . C A CCDS6653.1:NM_001097633.1:c.998cCg>cAg_NP_001091102.1:p.333P>Q Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 PRO A:296 A:333 39.0 0.269 T -56.7 128.1 39.0 0.269 0.0 HOH
 3.570
 C
 O
PRO B:296 B:333 41.0 0.283 T -60.1 129.9 41.0 0.283 0.0 HOH
 3.533
 C
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 PRO A:296 A:333 38.0 0.262 T -49.3 109.7 38.0 0.262 0.0 HOH
 4.010
 C
 O
PRO B:296 B:333 39.0 0.269 T -57.8 129.4 39.0 0.269 0.0 HOH
 4.644
 CG
 O
PRO C:296 C:333 41.0 0.283 T -60.5 131.0 NA NA NA
PRO D:296 D:333 38.0 0.262 T -42.2 112.5 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 PRO A:296 A:333 36.0 0.248 T -56.4 132.5 36.0 0.248 0.0 HOH
 3.388
 CA
 O
PRO B:296 B:333 38.0 0.262 T -61.3 132.1 NA NA NA
PRO C:296 C:333 39.0 0.269 T -56.7 134.4 NA NA NA
PRO D:296 D:333 39.0 0.269 T -63.7 132.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 PRO A:333 A:333 31.0 0.214 T -57.4 126.4