Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79118406 . C A CCDS6653.1:NM_001097633.1:c.1109cCg>cAg_NP_001091102.1:p.370P>Q Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 PRO A:333 A:370 32.0 0.221 -68.1 163.8 32.0 0.221 0.0 HOH
 3.747
 CB
 O
PRO B:333 B:370 31.0 0.214 -65.3 161.4 31.0 0.214 0.0 HOH
 3.421
 CB
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 PRO A:333 A:370 33.0 0.228 -88.5 164.9 33.0 0.228 0.0 HOH
 7.854
 CA
 O
PRO B:333 B:370 30.0 0.207 -65.0 172.0 30.0 0.207 0.0 HOH
 3.773
 CB
 O
PRO C:333 C:370 33.0 0.228 -60.3 173.4 NA NA NA
PRO D:333 D:370 33.0 0.228 -71.3 153.9 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 PRO A:333 A:370 32.0 0.221 -78.3 163.6 32.0 0.221 0.0 HOH
 3.312
 CG
 O
PRO B:333 B:370 31.0 0.214 -73.7 166.5 NA NA NA
PRO C:333 C:370 32.0 0.221 -70.9 164.1 NA NA NA
PRO D:333 D:370 32.0 0.221 -70.5 165.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 PRO A:370 A:370 39.0 0.269 -65.3 169.1