Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79118415 . A C CCDS6653.1:NM_001097633.1:c.1118gAt>gCt_NP_001091102.1:p.373D>A Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 SER A:336 A:373 58.0 0.504 S -89.3 -7.2 58.0 0.504 0.0 HOH
 2.691
 OG
 O
SER B:336 B:373 44.0 0.383 S -100.8 -4.2 44.0 0.383 0.0 HOH
 2.687
 OG
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 SER A:336 A:373 51.0 0.443 S -93.5 -16.6 51.0 0.443 0.0 HOH
 8.531
 C
 O
SER B:336 B:373 30.0 0.261 S -86.9 -14.0 30.0 0.261 0.0 HOH
 3.673
 CB
 O
SER C:336 C:373 34.0 0.296 S -87.1 -18.6 NA NA NA
SER D:336 D:373 50.0 0.435 S -94.9 -43.1 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 SER A:336 A:373 55.0 0.478 S -108.7 -4.7 55.0 0.478 0.0 HOH
 3.088
 O
 O
SER B:336 B:373 33.0 0.287 S -101.0 1.5 NA NA NA
SER C:336 C:373 45.0 0.391 S -103.9 -3.0 NA NA NA
SER D:336 D:373 60.0 0.522 S -105.4 10.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 ASP A:373 A:373 47.0 0.313 S -88.5 -19.8