Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79118423 . C A CCDS6653.1:NM_001097633.1:c.1126Cat>Aat_NP_001091102.1:p.376H>N Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 HIS A:339 A:376 60.0 0.308 E -95.6 140.4 60.0 0.308 0.0 HOH
 3.841
 CB
 O
HIS B:339 B:376 60.0 0.308 E -100.0 136.5 60.0 0.308 0.0 HOH
 3.828
 CB
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 HIS A:339 A:376 60.0 0.308 E -119.6 111.2 60.0 0.308 0.0 HOH
 3.261
 CB
 O
HIS B:339 B:376 51.0 0.262 E -125.0 134.8 51.0 0.262 0.0 HOH
 3.381
 ND1
 O
HIS C:339 C:376 57.0 0.292 E -113.3 143.8 NA NA NA
HIS D:339 D:376 64.0 0.328 E -110.0 140.8 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 HIS A:339 A:376 57.0 0.292 E -93.7 137.3 57.0 0.292 0.0 UDP
HOH
 9.684
2.777
 C
N
 O1B
O
HIS B:339 B:376 58.0 0.297 E -99.1 132.6 NA NA NA
HIS C:339 C:376 52.0 0.267 E -93.6 136.9 NA NA NA
HIS D:339 D:376 65.0 0.333 E -92.3 138.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 HIS A:376 A:376 66.0 0.338 E -87.8 130.1