Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 79118462 . A C CCDS6653.1:NM_001097633.1:c.1165Aac>Cac_NP_001091102.1:p.389N>H Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gak 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 SER A:352 A:389 14.0 0.122 H -48.4 -57.5 14.0 0.122 0.0 HOH
 2.710
 O
 O
SER B:352 B:389 17.0 0.148 H -52.6 -52.9 17.0 0.148 0.0 HOH
 2.689
 O
 O
2gam 1 Q09324 84.65 0.0 X-RAY
 2006-07-11 SER A:352 A:389 25.0 0.217 H -50.8 -56.7 25.0 0.217 0.0 HOH
 7.665
 O
 O
SER B:352 B:389 21.0 0.183 H -48.2 -52.3 21.0 0.183 0.0 HOH
 5.839
 C
 O
SER C:352 C:389 43.0 0.374 H -40.6 -55.9 NA NA NA
SER D:352 D:389 20.0 0.174 H -62.4 -54.8 NA NA NA
3otk 1 Q09324 84.4 0.0 X-RAY
 2011-09-14 SER A:352 A:389 16.0 0.139 H -50.3 -49.9 16.0 0.139 0.0 HOH
 3.056
 N
 O
SER B:352 B:389 11.0 0.096 H -61.1 -51.8 NA NA NA
SER C:352 C:389 14.0 0.122 H -57.7 -48.0 NA NA NA
SER D:352 D:389 17.0 0.148 H -59.6 -54.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02742-f1 1 Q02742 100.0 0.0 ASN A:389 A:389 39.0 0.244 H -57.7 -40.7