Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 8518052 . G A CCDS6472.2:NM_130391.3:c.1339Cag>Tag_NP_569075.2:p.447Q>* Homo sapiens protein tyrosine phosphatase, receptor type D (PTPRD), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4yh7 1 Q64487 95.43 0.0 X-RAY
 2015-05-06 GLN A:427 A:454 143.0 0.794 S -73.3 126.1 143.0 0.794 0.0
4yfd 2 Q64487 99.39 0.0 X-RAY
 2015-05-06 GLN B:427 A:454 93.0 0.517 -76.1 122.7 93.0 0.517 0.0
4yfg 1 Q64487 97.15 0.0 X-RAY
 2015-05-06 GLN A:417 B:444 98.0 0.544 -71.8 124.1 98.0 0.544 0.0
GLN B:417 A:444 92.0 0.511 -72.8 125.4 92.0 0.511 0.0
4yfe 1 Q64487 98.43 9e-123 X-RAY
 2015-05-06 GLN A:128 A:454 93.0 0.517 -72.8 127.8 93.0 0.517 0.0 HOH
 2.566
 O
 O
GLN B:128 B:454 84.0 0.467 -72.8 127.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p23468-f1 1 P23468 100.0 0.0 GLN A:447 A:447 121.0 0.672 -71.5 113.6