Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135738553 . G A CCDS14659.1:NM_000074.2:c.385Gag>Aag_NP_000065.1:p.129E>K Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 GLU A:14 A:129 63.0 0.332 -147.1 135.9 63.0 0.332 0.0 HOH
 2.224
 H
 H1
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 GLU A:14 A:129 68.0 0.358 E -139.0 121.4 23.0 0.121 0.237 D:None:0.158
E:None:0.116
GLU B:14 B:129 68.0 0.358 E -140.7 118.6 22.0 0.116 0.242 G:None:0.116
F:None:0.174
GLU C:14 C:129 65.0 0.342 E -143.3 117.0 22.0 0.116 0.226 I:None:0.116
H:None:0.153
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 GLU A:14 A:129 77.0 0.405 E -132.0 133.7 32.0 0.168 0.237 D:None:0.153
E:None:0.142
 HOH
 2.761
 O
 O
GLU B:14 B:129 68.0 0.358 E -133.3 131.9 20.0 0.105 0.253 G:None:0.111
F:None:0.211
 HOH
 2.761
 O
 O
GLU C:14 C:129 69.0 0.363 E -132.7 133.1 26.0 0.137 0.226 I:None:0.126
H:None:0.163
 HOH
 2.820
 O
 O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 GLU A:14 A:129 68.0 0.358 E -133.1 130.8 18.0 0.095 0.263 D:None:0.205
E:None:0.158
 PEG
HOH
 6.092
2.541
 OE1
OE2
 O4
O
GLU B:14 B:129 66.0 0.347 E -133.5 135.9 15.0 0.079 0.268 G:None:0.132
F:None:0.237
 HOH
 2.714
 O
 O
GLU C:14 C:129 69.0 0.363 E -133.2 130.9 18.0 0.095 0.268 I:None:0.153
H:None:0.226
 HOH
 2.684
 O
 O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 GLU A:17 A:129 73.0 0.384 -139.4 147.6 73.0 0.384 0.0
GLU B:17 B:129 81.0 0.426 E -146.3 145.9 73.0 0.384 0.042 G:P25942:0.042
GLU C:17 C:129 83.0 0.437 E -142.3 138.9 67.0 0.353 0.084 H:P25942:0.084
GLU D:17 D:129 83.0 0.437 E -146.7 154.6 NA NA NA
GLU E:17 E:129 83.0 0.437 E -147.6 139.1 NA NA NA
GLU F:17 F:129 72.0 0.379 -141.5 145.1 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 GLU A:10 A:129 88.0 0.463 -155.2 119.8 84.0 0.442 0.021 B:None:0.021
 HOH
 6.123
 N
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 GLU A:9 A:129 100.0 0.526 E -132.7 154.8 100.0 0.526 0.0 HOH
 3.002
 O
 O
GLU B:9 B:129 61.0 0.321 -116.7 128.2 61.0 0.321 0.0 HOH
 3.368
 O
 O
GLU C:9 C:129 71.0 0.374 E -146.4 148.9 71.0 0.374 0.0 HOH
 3.050
 OE1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 GLU A:129 A:129 80.0 0.421 E -130.3 126.5