Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741203 . C A CCDS14659.1:NM_000074.2:c.415Cag>Aag_NP_000065.1:p.139Q>K Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 GLN A:24 A:139 30.0 0.167 -103.0 154.0 30.0 0.167 0.0 HOH
 1.888
 O
 H1
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 GLN A:24 A:139 35.0 0.194 E -92.3 163.0 35.0 0.194 0.0
GLN B:24 B:139 34.0 0.189 E -86.3 163.3 34.0 0.189 0.0
GLN C:24 C:139 35.0 0.194 E -85.7 164.9 35.0 0.194 0.0
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 GLN A:24 A:139 20.0 0.111 E -108.5 154.0 20.0 0.111 0.0 NAG
PEG
TMO
HOH
 8.018
7.250
6.801
2.800
 OE1
OE1
NE2
O
 O6
O4
CAA
O
GLN B:24 B:139 43.0 0.239 E -109.5 155.4 43.0 0.239 0.0 NAG
PEG
TMO
HOH
 8.313
7.548
6.753
2.883
 NE2
NE2
OE1
O
 O6
O4
OAE
O
GLN C:24 C:139 29.0 0.161 E -111.3 152.8 29.0 0.161 0.0 NAG
PEG
TMO
HOH
 8.865
6.535
5.646
2.826
 OE1
OE1
NE2
O
 O6
O4
CAA
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 GLN A:24 A:139 66.0 0.367 E -105.7 154.3 66.0 0.367 0.0 HOH
 2.855
 O
 O
GLN B:24 B:139 56.0 0.311 E -104.5 153.0 56.0 0.311 0.0 NAG
HOH
 9.965
2.876
 NE2
O
 O6
O
GLN C:24 C:139 40.0 0.222 E -108.2 159.0 40.0 0.222 0.0 NAG
HOH
 8.956
2.698
 NE2
OE1
 O6
O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 GLN A:27 A:139 23.0 0.128 -99.7 141.7 23.0 0.128 0.0
GLN B:27 B:139 26.0 0.144 E -95.4 142.8 26.0 0.144 0.0 NAG
 9.754
 NE2
 O6
GLN C:27 C:139 28.0 0.156 E -97.4 142.7 28.0 0.156 0.0
GLN D:27 D:139 35.0 0.194 E -93.3 142.0 NA NA NA
GLN E:27 E:139 27.0 0.15 E -98.7 137.0 NA NA NA
GLN F:27 F:139 35.0 0.194 -94.0 144.7 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 GLN A:20 A:139 25.0 0.139 -98.4 146.1 25.0 0.139 0.0 HOH
 8.111
 O
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 GLN A:19 A:139 40.0 0.222 E -109.5 147.1 40.0 0.222 0.0 HOH
 2.874
 N
 O
GLN B:19 B:139 60.0 0.333 -101.5 155.7 60.0 0.333 0.0 HOH
 2.945
 N
 O
GLN C:19 C:139 58.0 0.322 E -109.5 138.7 58.0 0.322 0.0 HOH
 5.591
 NE2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 GLN A:139 A:139 18.0 0.1 E -101.1 148.7