Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741209 . G A CCDS14659.1:NM_000074.2:c.421Gct>Act_NP_000065.1:p.141A>T Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 ALA A:26 A:141 15.0 0.13 E -134.5 160.3 15.0 0.13 0.0 HOH
 3.706
 CA
 O
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 ALA A:26 A:141 10.0 0.087 E -122.8 144.7 3.0 0.026 0.061 E:None:0.061
ALA B:26 B:141 10.0 0.087 E -125.2 144.6 2.0 0.017 0.07 G:None:0.07
ALA C:26 C:141 12.0 0.104 E -129.4 146.1 3.0 0.026 0.078 I:None:0.078
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 ALA A:26 A:141 12.0 0.104 E -147.0 150.2 1.0 0.009 0.095 E:None:0.096
 TMO
HOH
 7.195
3.520
 CB
CA
 CAB
O
ALA B:26 B:141 13.0 0.113 E -147.2 145.8 2.0 0.017 0.096 G:None:0.096
 TMO
HOH
 7.718
3.508
 CB
CA
 OAE
O
ALA C:26 C:141 11.0 0.096 E -143.6 148.5 1.0 0.009 0.087 I:None:0.087
 PEG
TMO
HOH
 9.785
7.160
3.431
 O
CB
CA
 C3
CAD
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 ALA A:26 A:141 12.0 0.104 E -141.8 147.8 1.0 0.009 0.095 E:None:0.096
 PEG
HOH
 8.525
3.407
 CB
CA
 O4
O
ALA B:26 B:141 17.0 0.148 E -143.7 149.9 2.0 0.017 0.131 G:None:0.13
 HOH
 3.442
 CA
 O
ALA C:26 C:141 14.0 0.122 E -139.4 146.4 1.0 0.009 0.113 I:None:0.113
 HOH
 3.395
 CA
 O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 ALA A:29 A:141 13.0 0.113 E -130.2 141.8 13.0 0.113 0.0
ALA B:29 B:141 14.0 0.122 E -123.2 144.5 14.0 0.122 0.0
ALA C:29 C:141 14.0 0.122 E -118.7 142.1 14.0 0.122 0.0
ALA D:29 D:141 16.0 0.139 E -124.9 139.1 NA NA NA
ALA E:29 E:141 15.0 0.13 E -116.1 143.3 NA NA NA
ALA F:29 F:141 13.0 0.113 E -132.9 141.0 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 ALA A:22 A:141 10.0 0.087 E -150.8 150.1 10.0 0.087 0.0 HOH
 3.790
 CA
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 ALA A:21 A:141 13.0 0.113 E -132.6 148.0 13.0 0.113 0.0 HOH
 7.707
 O
 O
ALA B:21 B:141 5.0 0.043 E -119.8 144.5 5.0 0.043 0.0 HOH
 3.618
 CA
 O
ALA C:21 C:141 13.0 0.113 E -135.3 146.2 13.0 0.113 0.0 LKJ
HOH
 8.453
3.598
 O
CA
 O4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 ALA A:141 A:141 14.0 0.122 E -138.7 149.5