Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741218 . G A CCDS14659.1:NM_000074.2:c.430Gga>Aga_NP_000065.1:p.144G>R Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 GLY A:29 A:144 58.0 0.773 S 51.0 -135.1 58.0 0.773 0.0 HOH
 2.449
 O
 H2
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 GLY A:29 A:144 67.0 0.893 S 42.0 -152.8 12.0 0.16 0.733 E:None:0.693
B:P29965:0.093
GLY B:29 B:144 64.0 0.853 S 39.6 -157.9 9.0 0.12 0.733 G:None:0.68
C:P29965:0.093
GLY C:29 C:144 65.0 0.867 S 45.8 -158.5 11.0 0.147 0.72 I:None:0.667
A:P29965:0.093
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 GLY A:29 A:144 70.0 0.933 S 55.8 -142.9 19.0 0.253 0.68 E:None:0.613
B:P29965:0.093
 HOH
 3.496
 CA
 O
GLY B:29 B:144 69.0 0.92 S 52.8 -139.4 19.0 0.253 0.667 C:P29965:0.08
G:None:0.6
 HOH
 2.713
 O
 O
GLY C:29 C:144 70.0 0.933 S 57.8 -143.8 18.0 0.24 0.693 A:P29965:0.08
I:None:0.613
 PEG
HOH
 4.809
3.529
 O
CA
 C4
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 GLY A:29 A:144 73.0 0.973 S 53.5 -142.8 16.0 0.213 0.76 E:None:0.747
B:P29965:0.093
 HOH
 2.793
 O
 O
GLY B:29 B:144 69.0 0.92 S 60.6 -143.3 16.0 0.213 0.707 C:P29965:0.107
G:None:0.68
 HOH
 2.640
 O
 O
GLY C:29 C:144 71.0 0.947 S 54.8 -144.7 15.0 0.2 0.747 A:P29965:0.12
I:None:0.733
 HOH
 2.643
 O
 O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 GLY A:32 A:144 64.0 0.853 S 50.8 -154.0 54.0 0.72 0.133 B:P29965:0.133
GLY B:32 B:144 62.0 0.827 S 51.4 -149.7 1.0 0.013 0.814 C:P29965:0.12
G:P25942:0.813
GLY C:32 C:144 66.0 0.88 S 51.8 -145.1 1.0 0.013 0.867 A:P29965:0.133
H:P25942:0.853
GLY D:32 D:144 63.0 0.84 T 49.2 -153.4 NA NA NA
GLY E:32 E:144 62.0 0.827 T 43.5 -152.8 NA NA NA
GLY F:32 F:144 64.0 0.853 S 54.4 -152.3 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 GLY A:25 A:144 59.0 0.787 S 59.1 -129.7 59.0 0.787 0.0 HOH
 6.015
 O
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 GLY A:24 A:144 75.0 1.0 S 67.7 -129.1 54.0 0.72 0.28 B:P29965:0.28
 HOH
 8.513
 CA
 O
GLY B:24 B:144 59.0 0.787 S 78.8 -145.1 59.0 0.787 0.0 HOH
 7.344
 CA
 O
GLY C:24 C:144 24.0 0.32 -61.7 169.5 24.0 0.32 0.0 LKJ
HOH
 3.913
2.837
 CA
N
 O4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 GLY A:144 A:144 69.0 0.92 S 66.1 -139.7