Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741228 . C A CCDS14659.1:NM_000074.2:c.440aCc>aAc_NP_000065.1:p.147T>N Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 THR A:32 A:147 62.0 0.443 E -134.3 137.9 12.0 0.086 0.357 A:P29965:0.357
 HOH
 2.380
 OG1
 H1
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 THR A:32 A:147 57.0 0.407 E -145.1 137.3 5.0 0.036 0.371 B:P29965:0.371
THR B:32 B:147 56.0 0.4 E -143.9 140.0 5.0 0.036 0.364 C:P29965:0.364
THR C:32 C:147 57.0 0.407 E -140.1 140.3 4.0 0.029 0.378 A:P29965:0.379
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 THR A:32 A:147 61.0 0.436 E -132.0 136.9 9.0 0.064 0.372 B:P29965:0.371
 HOH
 2.259
 OG1
 O
THR B:32 B:147 60.0 0.429 E -132.3 136.8 10.0 0.071 0.358 C:P29965:0.357
 HOH
 2.326
 OG1
 O
THR C:32 C:147 58.0 0.414 E -131.8 136.9 9.0 0.064 0.35 A:P29965:0.35
 PEG
HOH
 5.217
2.283
 CA
OG1
 C2
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 THR A:32 A:147 61.0 0.436 E -128.7 138.0 11.0 0.079 0.357 B:P29965:0.357
 HOH
 2.289
 OG1
 O
THR B:32 B:147 61.0 0.436 E -133.6 139.3 11.0 0.079 0.357 C:P29965:0.357
 HOH
 2.379
 OG1
 O
THR C:32 C:147 59.0 0.421 E -134.4 134.8 9.0 0.064 0.357 A:P29965:0.357
 HOH
 2.271
 OG1
 O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 THR A:35 A:147 66.0 0.471 E -152.8 129.0 13.0 0.093 0.378 B:P29965:0.379
THR B:35 B:147 65.0 0.464 E -156.5 134.7 12.0 0.086 0.378 C:P29965:0.357
G:P25942:0.043
THR C:35 C:147 63.0 0.45 E -154.6 127.5 11.0 0.079 0.371 A:P29965:0.357
H:P25942:0.014
THR D:35 D:147 64.0 0.457 E -157.2 132.7 NA NA NA
THR E:35 E:147 63.0 0.45 E -157.0 129.6 NA NA NA
THR F:35 F:147 64.0 0.457 E -157.5 124.1 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 THR A:28 A:147 68.0 0.486 E -146.0 127.4 14.0 0.1 0.386 A:P29965:0.386
 HOH
 3.134
 OG1
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 THR A:27 A:147 60.0 0.429 E -140.7 134.9 5.0 0.036 0.393 B:P29965:0.393
 HOH
 6.994
 O
 O
THR B:27 B:147 64.0 0.457 E -144.5 137.2 7.0 0.05 0.407 C:P29965:0.407
 HOH
 6.741
 C
 O
THR C:27 C:147 127.0 0.907 -96.5 109.9 127.0 0.907 0.0 LKJ
HOH
 6.839
5.555
 N
N
 O5
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 THR A:147 A:147 69.0 0.493 E -131.7 129.6