Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741266 . C A CCDS14659.1:NM_000074.2:c.478Cag>Aag_NP_000065.1:p.160Q>K Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 GLN A:45 A:160 43.0 0.239 E -145.4 154.0 43.0 0.239 0.0 HOH
 6.058
 HE22
 H2
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 GLN A:45 A:160 42.0 0.233 E -134.3 169.3 42.0 0.233 0.0
GLN B:45 B:160 42.0 0.233 E -130.9 175.1 42.0 0.233 0.0
GLN C:45 C:160 43.0 0.239 E -135.3 170.4 43.0 0.239 0.0
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 GLN A:45 A:160 45.0 0.25 E -145.7 149.1 45.0 0.25 0.0 NAG
PEG
HOH
 9.988
3.254
4.767
 OE1
OE1
N
 C1
C1
O
GLN B:45 B:160 44.0 0.244 E -143.1 147.0 44.0 0.244 0.0 PEG
HOH
 3.191
4.010
 OE1
NE2
 O2
O
GLN C:45 C:160 41.0 0.228 E -147.0 148.7 41.0 0.228 0.0 PEG
HOH
 2.856
4.031
 OE1
NE2
 C1
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 GLN A:45 A:160 47.0 0.261 E -142.1 142.5 47.0 0.261 0.0 HOH
 4.759
 N
 O
GLN B:45 B:160 46.0 0.256 E -142.0 144.4 46.0 0.256 0.0 PEG
HOH
 9.843
4.825
 OE1
N
 O4
O
GLN C:45 C:160 44.0 0.244 E -143.2 143.1 44.0 0.244 0.0 HOH
 2.884
 OE1
 O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 GLN A:48 A:160 50.0 0.278 E -151.3 158.4 50.0 0.278 0.0 NAG
 8.270
 NE2
 O6
GLN B:48 B:160 50.0 0.278 -159.0 159.2 50.0 0.278 0.0
GLN C:48 C:160 51.0 0.283 -156.4 158.2 51.0 0.283 0.0
GLN D:48 D:160 50.0 0.278 -150.1 154.6 NA NA NA
GLN E:48 E:160 47.0 0.261 -158.6 159.8 NA NA NA
GLN F:48 F:160 49.0 0.272 -151.3 162.9 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 GLN A:41 A:160 36.0 0.2 E -153.3 143.2 36.0 0.2 0.0 HOH
 5.592
 NE2
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 GLN A:40 A:160 44.0 0.244 E -125.2 144.5 44.0 0.244 0.0 HOH
 3.528
 NE2
 O
GLN B:40 B:160 29.0 0.161 E -131.2 127.0 29.0 0.161 0.0 HOH
 4.685
 N
 O
GLN C:40 C:160 37.0 0.206 E -141.7 153.4 37.0 0.206 0.0 HOH
 7.897
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 GLN A:160 A:160 22.0 0.122 E -140.6 142.2