Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chrX | 135741275 | . | G | A | CCDS14659.1:NM_000074.2:c.487Gtt>Att_NP_000065.1:p.163V>I | Homo sapiens CD40 ligand (CD40LG), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1aly | 1 | P29965 | 100.0 | 9e-107 |
X-RAY |
1997-09-17 | VAL | A:48 | A:163 | 0.0 | 0.0 | E | -95.7 | 147.1 | 0.0 | 0.0 | 0.0 |
HOH |
2.762 |
CB |
H2 |
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| 1i9r | 1 | P29965 | 100.0 | 9e-107 |
X-RAY |
2002-03-20 | VAL | A:48 | A:163 | 1.0 | 0.006 | E | -112.1 | 140.0 | 1.0 | 0.006 | 0.0 | ||||||
| VAL | B:48 | B:163 | 1.0 | 0.006 | E | -115.7 | 148.0 | 1.0 | 0.006 | 0.0 | |||||||||||||
| VAL | C:48 | C:163 | 2.0 | 0.013 | E | -110.2 | 140.9 | 2.0 | 0.013 | 0.0 | |||||||||||||
| 6w9g | 1 | P29965 | 100.0 | 9e-107 |
X-RAY |
2020-12-23 | VAL | A:48 | A:163 | 0.0 | 0.0 | E | -108.4 | 141.3 | 0.0 | 0.0 | 0.0 |
HOH |
3.879 |
CB |
O |
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| VAL | B:48 | B:163 | 0.0 | 0.0 | E | -106.0 | 139.8 | 0.0 | 0.0 | 0.0 |
PEG HOH |
9.937 3.883 |
N CB |
C1 O |
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| VAL | C:48 | C:163 | 1.0 | 0.006 | E | -107.8 | 144.5 | 1.0 | 0.006 | 0.0 |
HOH |
3.937 |
CB |
O |
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| 7sgm | 1 | P29965 | 100.0 | 9e-107 |
X-RAY |
2022-02-02 | VAL | A:48 | A:163 | 0.0 | 0.0 | E | -107.1 | 140.8 | 0.0 | 0.0 | 0.0 |
HOH |
3.980 |
CB |
O |
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| VAL | B:48 | B:163 | 1.0 | 0.006 | E | -107.0 | 141.0 | 1.0 | 0.006 | 0.0 |
HOH |
3.886 |
CB |
O |
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| VAL | C:48 | C:163 | 0.0 | 0.0 | E | -104.2 | 138.8 | 0.0 | 0.0 | 0.0 |
HOH |
3.883 |
CB |
O |
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| 3qd6 | 1 | P29965 | 100.0 | 1e-106 |
X-RAY |
2011-02-02 | VAL | A:51 | A:163 | 0.0 | 0.0 | E | -78.3 | 147.1 | 0.0 | 0.0 | 0.0 | ||||||
| VAL | B:51 | B:163 | 1.0 | 0.006 | E | -84.0 | 153.5 | 1.0 | 0.006 | 0.0 | |||||||||||||
| VAL | C:51 | C:163 | 1.0 | 0.006 | E | -87.0 | 146.7 | 1.0 | 0.006 | 0.0 | |||||||||||||
| VAL | D:51 | D:163 | 1.0 | 0.006 | E | -86.3 | 148.0 | NA | NA | NA | |||||||||||||
| VAL | E:51 | E:163 | 1.0 | 0.006 | E | -80.2 | 149.3 | NA | NA | NA | |||||||||||||
| VAL | F:51 | F:163 | 1.0 | 0.006 | E | -84.4 | 148.1 | NA | NA | NA | |||||||||||||
| 6brb | 1 | P29965 | 100.0 | 5e-103 |
X-RAY |
2018-12-05 | VAL | A:44 | A:163 | 0.0 | 0.0 | E | -105.4 | 157.0 | 0.0 | 0.0 | 0.0 |
HOH |
7.112 |
O |
O |
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| 3lkj | 1 | P29965 | 100.0 | 6e-102 |
X-RAY |
2011-02-02 | VAL | A:43 | A:163 | 1.0 | 0.006 | E | -113.4 | 139.9 | 1.0 | 0.006 | 0.0 |
HOH |
4.708 |
O |
O |
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| VAL | B:43 | B:163 | 1.0 | 0.006 | E | -91.4 | 158.3 | 1.0 | 0.006 | 0.0 |
HOH |
6.810 |
CG2 |
O |
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| VAL | C:43 | C:163 | 1.0 | 0.006 | E | -100.7 | 158.0 | 1.0 | 0.006 | 0.0 |
HOH |
2.334 |
O |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p29965-f1 | 1 | P29965 | 100.0 | 0.0 | VAL | A:163 | A:163 | 0.0 | 0.0 | E | -102.7 | 140.1 | |