Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741308 . C A CCDS14659.1:NM_000074.2:c.520Caa>Aaa_NP_000065.1:p.174Q>K Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 GLN A:59 A:174 62.0 0.344 E -132.5 127.2 0.0 0.0 0.344 A:P29965:0.344
 HOH
 2.478
 HE22
 H2
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 GLN A:59 A:174 55.0 0.306 E -106.6 131.6 2.0 0.011 0.295 B:P29965:0.294
GLN B:59 B:174 56.0 0.311 E -98.6 133.9 2.0 0.011 0.3 C:P29965:0.3
GLN C:59 C:174 54.0 0.3 E -102.1 130.4 0.0 0.0 0.3 A:P29965:0.3
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 GLN A:59 A:174 60.0 0.333 E -134.7 138.4 6.0 0.033 0.3 B:P29965:0.3
 HOH
 6.907
 O
 O
GLN B:59 B:174 58.0 0.322 E -122.5 118.1 4.0 0.022 0.3 C:P29965:0.3
 HOH
 6.836
 O
 O
GLN C:59 C:174 58.0 0.322 E -129.1 134.2 1.0 0.006 0.316 A:P29965:0.317
 HOH
 6.838
 O
 O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 GLN A:59 A:174 58.0 0.322 E -126.7 136.9 4.0 0.022 0.3 B:P29965:0.3
 HOH
 6.802
 O
 O
GLN B:59 B:174 62.0 0.344 E -116.2 123.8 5.0 0.028 0.316 C:P29965:0.317
 HOH
 2.966
 CB
 O
GLN C:59 C:174 57.0 0.317 E -126.1 138.5 2.0 0.011 0.306 A:P29965:0.306
 HOH
 6.906
 O
 O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 GLN A:62 A:174 53.0 0.294 E -122.9 128.5 1.0 0.006 0.288 B:P29965:0.289
GLN B:62 B:174 54.0 0.3 E -119.1 129.7 2.0 0.011 0.289 C:P29965:0.289
GLN C:62 C:174 51.0 0.283 E -119.7 133.8 1.0 0.006 0.277 A:P29965:0.278
GLN D:62 D:174 54.0 0.3 E -119.3 134.7 NA NA NA
GLN E:62 E:174 53.0 0.294 E -122.1 126.9 NA NA NA
GLN F:62 F:174 56.0 0.311 E -123.4 129.0 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 GLN A:55 A:174 57.0 0.317 E -128.7 112.1 0.0 0.0 0.317 A:P29965:0.317
 HOH
 6.431
 O
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 GLN A:54 A:174 56.0 0.311 E -129.8 124.7 22.0 0.122 0.189 B:P29965:0.189
 LKJ
HOH
 9.123
3.957
 OE1
CB
 C26
O
GLN B:54 B:174 62.0 0.344 E -121.1 124.2 12.0 0.067 0.277 C:P29965:0.278
 LKJ
HOH
 4.153
2.626
 N
OE1
 C27
O
GLN C:54 C:174 51.0 0.283 E -129.0 133.7 37.0 0.206 0.077 A:P29965:0.078
 LKJ
HOH
 5.239
4.417
 CB
CB
 O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 GLN A:174 A:174 60.0 0.333 E -115.2 128.6