Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741405 . T A CCDS14659.1:NM_000074.2:c.617cTc>cAc_NP_000065.1:p.206L>H Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 LEU A:91 A:206 43.0 0.253 E -140.2 152.3 0.0 0.0 0.253 A:P29965:0.253
 HOH
 2.927
 CD1
 H1
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 LEU A:91 A:206 30.0 0.176 E -132.8 167.3 0.0 0.0 0.176 C:P29965:0.176
LEU B:91 B:206 34.0 0.2 E -129.5 171.3 0.0 0.0 0.2 A:P29965:0.2
LEU C:91 C:206 33.0 0.194 E -132.8 170.5 0.0 0.0 0.194 B:P29965:0.194
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 LEU A:91 A:206 45.0 0.265 E -144.5 146.9 0.0 0.0 0.265 C:P29965:0.265
 NAG
HOH
 8.594
3.319
 O
CD1
 C8
O
LEU B:91 B:206 43.0 0.253 E -143.1 147.9 0.0 0.0 0.253 A:P29965:0.253
 NAG
HOH
 7.252
3.385
 O
CD2
 O7
O
LEU C:91 C:206 43.0 0.253 E -142.5 151.2 0.0 0.0 0.253 B:P29965:0.253
 NAG
HOH
 7.357
3.483
 O
CD2
 O7
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 LEU A:91 A:206 40.0 0.235 E -138.9 149.1 1.0 0.006 0.229 C:P29965:0.229
 NAG
HOH
 8.551
3.584
 O
CD2
 C8
O
LEU B:91 B:206 40.0 0.235 E -138.8 149.8 0.0 0.0 0.235 A:P29965:0.235
 NAG
HOH
 8.722
3.699
 O
CD2
 C8
O
LEU C:91 C:206 43.0 0.253 E -139.2 149.8 1.0 0.006 0.247 B:P29965:0.247
 NAG
HOH
 8.717
3.540
 O
CD2
 C8
O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 LEU A:94 A:206 44.0 0.259 -137.1 162.4 1.0 0.006 0.253 C:P29965:0.253
 NAG
 8.395
 O
 C8
LEU B:94 B:206 46.0 0.271 -143.3 165.8 1.0 0.006 0.265 A:P29965:0.265
 NAG
 8.361
 O
 O7
LEU C:94 C:206 44.0 0.259 -141.8 168.2 1.0 0.006 0.253 B:P29965:0.253
 NAG
 7.150
 O
 O6
LEU D:94 D:206 48.0 0.282 -139.7 166.2 NA NA NA
LEU E:94 E:206 44.0 0.259 -141.0 163.2 NA NA NA
LEU F:94 F:206 46.0 0.271 -140.1 162.6 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 LEU A:87 A:206 37.0 0.218 E -129.6 148.7 0.0 0.0 0.218 A:P29965:0.218
 NAG
NAG
HOH
 8.251
9.699
5.673
 O
O
CD2
 C1
O7
O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 LEU A:86 A:206 55.0 0.324 E -144.6 144.4 53.0 0.312 0.012 C:P29965:0.012
 NAG
NAG
LKJ
HOH
 8.053
9.838
9.834
6.269
 O
N
CD2
C
 O5
C8
C21
O
LEU B:86 B:206 40.0 0.235 E -149.0 148.1 5.0 0.029 0.206 A:P29965:0.206
 NAG
NAG
LKJ
HOH
 7.091
9.978
7.722
4.394
 O
O
CD2
CD1
 C8
O7
C26
O
LEU C:86 C:206 43.0 0.253 E -142.3 147.1 3.0 0.018 0.235 B:P29965:0.235
 LKJ
NAG
NAG
HOH
 6.745
7.359
9.609
3.880
 CD2
O
O
CD1
 C28
C8
O7
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 LEU A:206 A:206 42.0 0.247 E -136.4 150.2